RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
RDH11-207ENST00000554731 MYBPC2Q14324 1141 aa13.56□□□□□ -0.24
RDH11-207ENST00000554731 TMEM119Q4V9L6 283 aa13.56□□□□□ -0.24
RDH11-207ENST00000554731 OVOS1Q6IE37 1185 aa13.56□□□□□ -0.24
RDH11-207ENST00000554731 C1orf228Q6PIY5 440 aa13.56□□□□□ -0.24
RDH11-207ENST00000554731 HAUS6Q7Z4H7 955 aa13.56□□□□□ -0.24
RDH11-207ENST00000554731 CELF5Q8N6W0 485 aaKnown RBP13.56□□□□□ -0.24
RDH11-207ENST00000554731 MSANTD3Q96H12 275 aa13.56□□□□□ -0.24
RDH11-207ENST00000554731 TSPAN18Q96SJ8 248 aa13.56□□□□□ -0.24
RDH11-207ENST00000554731 KIF2CQ99661 725 aa13.56□□□□□ -0.24
RDH11-207ENST00000554731 LRRC3Q9BY71 257 aa13.56□□□□□ -0.24
RDH11-207ENST00000554731 DNAJC25Q9H1X3 360 aa13.56□□□□□ -0.24
RDH11-207ENST00000554731 RPF1Q9H9Y2 349 aaKnown RBP13.56□□□□□ -0.24
RDH11-207ENST00000554731 ODF2LQ9ULJ1 636 aa13.56□□□□□ -0.24
RDH11-207ENST00000554731 ASB3Q9Y575 518 aa13.56□□□□□ -0.24
RDH11-207ENST00000554731 PDCD11Q14690 1871 aaKnown RBP13.56□□□□□ -0.24
RDH11-207ENST00000554731 NCANO14594 1321 aa13.56□□□□□ -0.24
RDH11-207ENST00000554731 MYH11P35749 1972 aa13.56□□□□□ -0.24
RDH11-207ENST00000554731 OGTO15294 1046 aa13.55□□□□□ -0.24
RDH11-207ENST00000554731 CHADO15335 359 aa13.55□□□□□ -0.24
RDH11-207ENST00000554731 CHRNB1P11230 501 aa13.55□□□□□ -0.24
RDH11-207ENST00000554731 ODC1P11926 461 aa13.55□□□□□ -0.24
RDH11-207ENST00000554731 CXCL12P48061 93 aa13.55□□□□□ -0.24
RDH11-207ENST00000554731 GUCY2FP51841 1108 aa13.55□□□□□ -0.24
RDH11-207ENST00000554731 KPNA1P52294 538 aaPredicted RBP13.55□□□□□ -0.24
RDH11-207ENST00000554731 ATXN1P54253 815 aaKnown RBP13.55□□□□□ -0.24
RDH11-207ENST00000554731 FCHO2Q0JRZ9 810 aa13.55□□□□□ -0.24
RDH11-207ENST00000554731 LRRC32Q14392 662 aa13.55□□□□□ -0.24
RDH11-207ENST00000554731 ENOX2Q16206 610 aaKnown RBP13.55□□□□□ -0.24
RDH11-207ENST00000554731 ARSHQ5FYA8 562 aa13.55□□□□□ -0.24
RDH11-207ENST00000554731 ARL6IP4Q66PJ3 421 aaKnown RBP13.55□□□□□ -0.24
RDH11-207ENST00000554731 LAIR1Q6GTX8 287 aa13.55□□□□□ -0.24
RDH11-207ENST00000554731 CENPPQ6IPU0 288 aa13.55□□□□□ -0.24
RDH11-207ENST00000554731 ARMCX5Q6P1M9 558 aa13.55□□□□□ -0.24
RDH11-207ENST00000554731 TMC8Q8IU68 726 aa13.55□□□□□ -0.24
RDH11-207ENST00000554731 ARID3BQ8IVW6 561 aaPredicted RBP13.55□□□□□ -0.24
RDH11-207ENST00000554731 ATAD1Q8NBU5 361 aa13.55□□□□□ -0.24
RDH11-207ENST00000554731 KCNN1Q92952 543 aa13.55□□□□□ -0.24
RDH11-207ENST00000554731 RSPRY1Q96DX4 576 aa13.55□□□□□ -0.24
RDH11-207ENST00000554731 CRISPLD1Q9H336 500 aa13.55□□□□□ -0.24
RDH11-207ENST00000554731 C8orf33Q9H7E9 229 aaPredicted RBP13.55□□□□□ -0.24
RDH11-207ENST00000554731 SLC27A5Q9Y2P5 690 aa13.55□□□□□ -0.24
RDH11-207ENST00000554731 TICRRQ7Z2Z1 1910 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 COL4A2P08572 1712 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 MTMR11A4FU01 709 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 SLC38A8A6NNN8 435 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 K7ENM7 598 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 DPYSL4O14531 572 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 SLC26A4O43511 780 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 FGF19O95750 216 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 PIGRP01833 764 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 TGM1P22735 817 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 PAX3P23760 479 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 LILRA4P59901 499 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 SATB1Q01826 763 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 LPAL2Q16609 132 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 ARHGAP15Q53QZ3 475 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 STXBP5Q5T5C0 1151 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 SPATA1Q5VX52 437 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 PRR23BQ6ZRT6 265 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 DNAJB7Q7Z6W7 309 aaPredicted RBP13.54□□□□□ -0.24
RDH11-207ENST00000554731 ITIH5Q86UX2 942 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 GPBP1Q86WP2 473 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 CD302Q8IX05 232 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 SPEM1Q8N4L4 309 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 MYCT1Q8N699 235 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 FAM200AQ8TCP9 573 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 PSMG2Q969U7 264 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 FAM212AQ96EL1 285 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 SENP8Q96LD8 212 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 AK8Q96MA6 479 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 REEP2Q9BRK0 252 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 MSTO1Q9BUK6 570 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 TBX20Q9UMR3 447 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 DNAH14Q0VDD8 3507 aa13.54□□□□□ -0.24
RDH11-207ENST00000554731 CACNA1BQ00975 2339 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 A0A0B4J269 797 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 H3BQV1 296 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 PPEF2O14830 753 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 FAM189A1O60320 539 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 FAM13AO94988 1023 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 ADRB2P07550 413 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 SOX9P48436 509 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 GAS6Q14393 721 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 DHX8Q14562 1220 aaKnown RBP13.53□□□□□ -0.24
RDH11-207ENST00000554731 JADE1Q6IE81 842 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 GAREM2Q75VX8 874 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 RALGPS2Q86X27 583 aaPredicted RBP13.53□□□□□ -0.24
RDH11-207ENST00000554731 GPIHBP1Q8IV16 184 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 TTC9BQ8N6N2 239 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 CALML4Q96GE6 196 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 RTKNQ9BST9 563 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 ATXN3LQ9H3M9 355 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 PARVGQ9HBI0 331 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 PARD6AQ9NPB6 346 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 OBP2AQ9NY56 170 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 HSFX1Q9UBD0 423 aa13.53□□□□□ -0.24
RDH11-207ENST00000554731 MYBPHLA2RUH7 354 aa13.52□□□□□ -0.25
RDH11-207ENST00000554731 SPECC1L-ADORA2AF8WAN1 911 aa13.52□□□□□ -0.25
RDH11-207ENST00000554731 LRP3O75074 770 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms