RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 HAND2P61296 217 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 TFAP4Q01664 338 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 PLS1Q14651 629 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 SKIDA1Q1XH10 827 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 ZFYVE27Q5T4F4 411 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 TTC22Q5TAA0 569 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 WDR78Q5VTH9 848 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 MFSD14CQ5VZR4 134 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 CD276Q5ZPR3 534 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 SLFN13Q68D06 897 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 BORAQ6PGQ7 559 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 PTRH1Q86Y79 214 aaKnown RBP4.88□□□□□ -1.63
VTI1B-203ENST00000554636 CCAR1Q8IX12 1150 aaKnown RBP4.88□□□□□ -1.63
VTI1B-203ENST00000554636 ABRAQ8N0Z2 381 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 TRPV1Q8NER1 839 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 SH3RF2Q8TEC5 729 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 STAG1Q8WVM7 1258 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 RILPL2Q969X0 211 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 LCORQ96JN0 433 aaPredicted RBP4.88□□□□□ -1.63
VTI1B-203ENST00000554636 DHRS4Q9BTZ2 278 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 TMEM168Q9H0V1 697 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 MROH8Q9H579 483 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 SLC39A2Q9NP94 309 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 IL17RBQ9NRM6 502 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 RIC8BQ9NVN3 520 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 CLIP2Q9UDT6 1046 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 ZDHHC9Q9Y397 364 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 NUB1Q9Y5A7 615 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 NEDD4P46934 1319 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 TSPY2A6NKD2 308 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 H0YGN5 161 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 ACOT7O00154 380 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 ATP2A1O14983 1001 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 STRNO43815 780 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 RANBP6O60518 1105 aaKnown RBP4.87□□□□□ -1.63
VTI1B-203ENST00000554636 PLA2G6O60733 806 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 CRTAMO95727 393 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 SLC25A27O95847 323 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 TFRCP02786 760 aaKnown RBP4.87□□□□□ -1.63
VTI1B-203ENST00000554636 PCP11498 1178 aaKnown RBP4.87□□□□□ -1.63
VTI1B-203ENST00000554636 COL6A1P12109 1028 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 CYP2C19P33261 490 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 COPB2P35606 906 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 STAT3P40763 770 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 OAZ1P54368 228 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 PFKPQ01813 784 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 HABP4Q5JVS0 413 aaKnown RBP4.87□□□□□ -1.63
VTI1B-203ENST00000554636 ARHGAP36Q6ZRI8 547 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 EP400NLQ6ZTU2 488 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 NECAB2Q7Z6G3 386 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 OSTM1Q86WC4 334 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 ZC3H7AQ8IWR0 971 aaKnown RBP4.87□□□□□ -1.63
VTI1B-203ENST00000554636 LGI4Q8N135 537 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 CISD2Q8N5K1 135 aaKnown RBP4.87□□□□□ -1.63
VTI1B-203ENST00000554636 STPG3Q8N7X2 389 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 DTX3Q8N9I9 347 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 FBXW5Q969U6 566 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 PAWRQ96IZ0 340 aaKnown RBP4.87□□□□□ -1.63
VTI1B-203ENST00000554636 MAML3Q96JK9 1138 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 HTATIP2Q9BUP3 242 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 TEX13BQ9BXU2 312 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 PRO3102Q9H379 93 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 SLC38A10Q9HBR0 1119 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 DLL4Q9NR61 685 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 DIAPH3Q9NSV4 1193 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 TCP11L1Q9NUJ3 509 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 ARHGAP20Q9P2F6 1191 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 DDX20Q9UHI6 824 aaKnown RBP4.87□□□□□ -1.63
VTI1B-203ENST00000554636 ZFP69BQ9UJL9 534 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 FEM1BQ9UK73 627 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 CBLCQ9ULV8 474 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 RIPK3Q9Y572 518 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 PFASO15067 1338 aa4.87□□□□□ -1.63
VTI1B-203ENST00000554636 RANBP2P49792 3224 aaKnown RBP4.86□□□□□ -1.63
VTI1B-203ENST00000554636 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.86□□□□□ -1.63
VTI1B-203ENST00000554636 CCDC66A2RUB6 948 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 TMEM232C9JQI7 657 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 HIP1O00291 1037 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 B4GALT3O60512 393 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 CYP7B1O75881 506 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 RASGRP1O95267 797 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 PGK2P07205 417 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 SNHG28P0DPA3 235 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 FCER1AP12319 257 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 MCCP23508 829 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 SLC1A4P43007 532 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 STAT2P52630 851 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 GABREP78334 506 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 KCTD2Q14681 263 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 SF3A1Q15459 793 aaKnown RBP4.86□□□□□ -1.63
VTI1B-203ENST00000554636 RRP12Q5JTH9 1297 aaKnown RBP4.86□□□□□ -1.63
VTI1B-203ENST00000554636 AKNAD1Q5T1N1 836 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 BTBD8Q5XKL5 378 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 SNRNP48Q6IEG0 339 aaKnown RBP4.86□□□□□ -1.63
VTI1B-203ENST00000554636 CWC27Q6UX04 472 aaKnown RBP4.86□□□□□ -1.63
VTI1B-203ENST00000554636 DPP9Q86TI2 863 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 FAM160B2Q86V87 743 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 PRPF38AQ8NAV1 312 aaKnown RBP4.86□□□□□ -1.63
VTI1B-203ENST00000554636 NUDT10Q8NFP7 164 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 PCDH19Q8TAB3 1148 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms