RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CCDC47Q96A33 483 aaKnown RBP14.1□□□□□ -0.15
SHMT2-211ENST00000554310 LRFN3Q9BTN0 628 aa14.1□□□□□ -0.15
SHMT2-211ENST00000554310 GOLPH3LQ9H4A5 285 aa14.1□□□□□ -0.15
SHMT2-211ENST00000554310 PDE11AQ9HCR9 933 aa14.1□□□□□ -0.15
SHMT2-211ENST00000554310 EPS15L1Q9UBC2 864 aa14.1□□□□□ -0.15
SHMT2-211ENST00000554310 TIMM13Q9Y5L4 95 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-211ENST00000554310 DOCK6Q96HP0 2047 aa14.1□□□□□ -0.15
SHMT2-211ENST00000554310 CCL16O15467 120 aa14.09□□□□□ -0.15
SHMT2-211ENST00000554310 LRG1P02750 347 aa14.09□□□□□ -0.15
SHMT2-211ENST00000554310 ITGB3P05106 788 aa14.09□□□□□ -0.15
SHMT2-211ENST00000554310 FSHRP23945 695 aa14.09□□□□□ -0.15
SHMT2-211ENST00000554310 POLR2BP30876 1174 aaKnown RBP14.09□□□□□ -0.15
SHMT2-211ENST00000554310 SIGLEC14Q08ET2 396 aa14.09□□□□□ -0.15
SHMT2-211ENST00000554310 MYBPC2Q14324 1141 aa14.09□□□□□ -0.15
SHMT2-211ENST00000554310 SNRNP35Q16560 246 aaKnown RBP14.09□□□□□ -0.15
SHMT2-211ENST00000554310 KNOP1Q1ED39 458 aaKnown RBP14.09□□□□□ -0.15
SHMT2-211ENST00000554310 KMT5BQ4FZB7 885 aa14.09□□□□□ -0.15
SHMT2-211ENST00000554310 TRIM67Q6ZTA4 783 aa14.09□□□□□ -0.15
SHMT2-211ENST00000554310 GET4Q7L5D6 327 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-211ENST00000554310 GRASPQ7Z6J2 395 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-211ENST00000554310 UBALD2Q8IYN6 164 aa14.09□□□□□ -0.15
SHMT2-211ENST00000554310 C1orf127Q8N9H9 656 aa14.09□□□□□ -0.15
SHMT2-211ENST00000554310 XXYLT1Q8NBI6 393 aa14.09□□□□□ -0.15
SHMT2-211ENST00000554310 GPT2Q8TD30 523 aa14.09□□□□□ -0.15
SHMT2-211ENST00000554310 ANKRD36BP1Q96IX9 119 aa14.09□□□□□ -0.15
SHMT2-211ENST00000554310 MTMR12Q9C0I1 747 aa14.09□□□□□ -0.15
SHMT2-211ENST00000554310 CYP4F11Q9HBI6 524 aa14.09□□□□□ -0.15
SHMT2-211ENST00000554310 IGSF9Q9P2J2 1179 aa14.09□□□□□ -0.15
SHMT2-211ENST00000554310 POLIQ9UNA4 740 aa14.09□□□□□ -0.15
SHMT2-211ENST00000554310 INSL5Q9Y5Q6 135 aa14.09□□□□□ -0.15
SHMT2-211ENST00000554310 ZFP37Q9Y6Q3 630 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-211ENST00000554310 ZNF318Q5VUA4 2279 aa14.09□□□□□ -0.15
SHMT2-211ENST00000554310 GOLGA6L4A6NEF3 574 aa14.08□□□□□ -0.16
SHMT2-211ENST00000554310 KPNA7A9QM74 516 aa14.08□□□□□ -0.16
SHMT2-211ENST00000554310 N4BP1O75113 896 aaKnown RBP14.08□□□□□ -0.16
SHMT2-211ENST00000554310 TNNC2P02585 160 aa14.08□□□□□ -0.16
SHMT2-211ENST00000554310 RPN1P04843 607 aaKnown RBP14.08□□□□□ -0.16
SHMT2-211ENST00000554310 MRE11P49959 708 aa14.08□□□□□ -0.16
SHMT2-211ENST00000554310 CYP2J2P51589 502 aa14.08□□□□□ -0.16
SHMT2-211ENST00000554310 ZNF445P59923 1031 aa14.08□□□□□ -0.16
SHMT2-211ENST00000554310 ADCY1Q08828 1119 aa14.08□□□□□ -0.16
SHMT2-211ENST00000554310 DPYDQ12882 1025 aa14.08□□□□□ -0.16
SHMT2-211ENST00000554310 STK4Q13043 487 aa14.08□□□□□ -0.16
SHMT2-211ENST00000554310 GPR17Q13304 367 aa14.08□□□□□ -0.16
SHMT2-211ENST00000554310 PABPC1LQ4VXU2 614 aaKnown RBP14.08□□□□□ -0.16
SHMT2-211ENST00000554310 METTL23Q86XA0 190 aa14.08□□□□□ -0.16
SHMT2-211ENST00000554310 WDR49Q8IV35 697 aa14.08□□□□□ -0.16
SHMT2-211ENST00000554310 CXorf38Q8TB03 319 aa14.08□□□□□ -0.16
SHMT2-211ENST00000554310 INTS13Q9NVM9 706 aa14.08□□□□□ -0.16
SHMT2-211ENST00000554310 LIMD1Q9UGP4 676 aa14.08□□□□□ -0.16
SHMT2-211ENST00000554310 NOTCH4Q99466 2003 aa14.08□□□□□ -0.16
SHMT2-211ENST00000554310 TULP1O00294 542 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-211ENST00000554310 CYB561D2O14569 222 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 CLIC2O15247 247 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 RHOBTB3O94955 611 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 ZNF202O95125 648 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 KIF20AO95235 890 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 SEC24AO95486 1093 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 ASGR2P07307 311 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 LAMP2P13473 410 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 RBP5P82980 135 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 PLD1Q13393 1074 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 PSMD6Q15008 389 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 DUOXA2Q1HG44 320 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 RNF19BQ6ZMZ0 732 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 ELMOD1Q8N336 334 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 OR10T2Q8NGX3 314 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 TMEM174Q8WUU8 243 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 NXPE3Q969Y0 559 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 BORCS6Q96GS4 357 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 MYADMQ96S97 322 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 AVENQ9NQS1 362 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-211ENST00000554310 HSFX1Q9UBD0 423 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 AGAP1Q9UPQ3 857 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 R3HCC1Q9Y3T6 440 aaKnown RBP14.07□□□□□ -0.16
SHMT2-211ENST00000554310 YIPF1Q9Y548 306 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 PTPRJQ12913 1337 aa14.07□□□□□ -0.16
SHMT2-211ENST00000554310 TMEM221A6NGB7 291 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 M0R296 226 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 PDXKO00764 312 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 EXOC3O60645 756 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 KRT19P08727 400 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 OR4Q2P0C623 313 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 NTHL1P78549 312 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 CYP24A1Q07973 514 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 SMARCB1Q12824 385 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 BFSP1Q12934 665 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 MYO1EQ12965 1108 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 KCNB1Q14721 858 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 LMBRD2Q68DH5 695 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-211ENST00000554310 CAVIN1Q6NZI2 390 aaKnown RBP14.06□□□□□ -0.16
SHMT2-211ENST00000554310 BMP8AQ7Z5Y6 402 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 SLC9A9Q8IVB4 645 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 FMR1NBQ8N0W7 255 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-211ENST00000554310 THEM5Q8N1Q8 247 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 CSGALNACT2Q8N6G5 542 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 OR5B17Q8NGF7 314 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 SPATA18Q8TC71 538 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 FNBP1Q96RU3 617 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms