RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 MAFBQ9Y5Q3 323 aaPredicted RBP15.44■□□□□ 0.06
ACTN1-211ENST00000553882 RLFQ13129 1914 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 PSMC4P43686 418 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 DCAF15Q66K64 600 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 SLFN12LQ6IEE8 588 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 MFSD7Q6UXD7 560 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 TRIM72Q6ZMU5 477 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 PHF13Q86YI8 300 aaPredicted RBP15.43■□□□□ 0.06
ACTN1-211ENST00000553882 EXD1Q8NHP7 514 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 P3H4Q92791 437 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 SGSM3Q96HU1 749 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 MTMR12Q9C0I1 747 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 ADAMTS5Q9UNA0 930 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 ZNF148Q9UQR1 794 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.43■□□□□ 0.06
ACTN1-211ENST00000553882 SCINQ9Y6U3 715 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 IVNS1ABPQ9Y6Y0 642 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 PHIPQ8WWQ0 1821 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 NFKBIEO00221 500 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 ATP5DP30049 168 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 ARL2P36404 184 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 OAZ1P54368 228 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 CAV1Q03135 178 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 ENPEPQ07075 957 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 CAPSQ13938 189 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 STXBP2Q15833 593 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 HIBCHQ6NVY1 386 aaPredicted RBP15.43■□□□□ 0.06
ACTN1-211ENST00000553882 SCARA5Q6ZMJ2 495 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 EEPD1Q7L9B9 569 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 PARP9Q8IXQ6 854 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 ANKRD35Q8N283 1001 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 ZNF668Q96K58 619 aaPredicted RBP15.43■□□□□ 0.06
ACTN1-211ENST00000553882 ADAM33Q9BZ11 813 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 IMPG2Q9BZV3 1241 aa15.43■□□□□ 0.06
ACTN1-211ENST00000553882 SPDYE16A6NNV3 312 aaPredicted RBP15.42■□□□□ 0.06
ACTN1-211ENST00000553882 KRT1P04264 644 aa15.42■□□□□ 0.06
ACTN1-211ENST00000553882 GHRP10912 638 aa15.42■□□□□ 0.06
ACTN1-211ENST00000553882 TBXAS1P24557 533 aaPredicted RBP15.42■□□□□ 0.06
ACTN1-211ENST00000553882 KLRC2P26717 231 aa15.42■□□□□ 0.06
ACTN1-211ENST00000553882 C1QBPQ07021 282 aaKnown RBP15.42■□□□□ 0.06
ACTN1-211ENST00000553882 ZNF252P-AS1Q0IIN9 211 aa15.42■□□□□ 0.06
ACTN1-211ENST00000553882 XRCC4Q13426 336 aa15.42■□□□□ 0.06
ACTN1-211ENST00000553882 ANGEL2Q5VTE6 544 aaKnown RBP15.42■□□□□ 0.06
ACTN1-211ENST00000553882 PLCD3Q8N3E9 789 aa15.42■□□□□ 0.06
ACTN1-211ENST00000553882 MMP8P22894 467 aa15.42■□□□□ 0.06
ACTN1-211ENST00000553882 MYL6P60660 151 aa15.42■□□□□ 0.06
ACTN1-211ENST00000553882 FASTKD3Q14CZ7 662 aaKnown RBP15.42■□□□□ 0.06
ACTN1-211ENST00000553882 TMED2Q15363 201 aa15.42■□□□□ 0.06
ACTN1-211ENST00000553882 DALRD3Q5D0E6 543 aaKnown RBP15.42■□□□□ 0.06
ACTN1-211ENST00000553882 CYP4A22Q5TCH4 519 aa15.42■□□□□ 0.06
ACTN1-211ENST00000553882 DCUN1D2Q6PH85 259 aa15.42■□□□□ 0.06
ACTN1-211ENST00000553882 CATSPERGQ6ZRH7 1159 aa15.42■□□□□ 0.06
ACTN1-211ENST00000553882 DEFB132Q7Z7B7 95 aa15.42■□□□□ 0.06
ACTN1-211ENST00000553882 MRRFQ96E11 262 aaKnown RBP15.42■□□□□ 0.06
ACTN1-211ENST00000553882 VCPIP1Q96JH7 1222 aa15.42■□□□□ 0.06
ACTN1-211ENST00000553882 SAYSD1Q9NPB0 183 aa15.42■□□□□ 0.06
ACTN1-211ENST00000553882 ADGRA2Q96PE1 1338 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 CDH16O75309 829 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 LDHAP00338 332 aaKnown RBP15.41■□□□□ 0.06
ACTN1-211ENST00000553882 WEE2P0C1S8 567 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 MARK3P27448 753 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 STX2P32856 288 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 MAGEA4P43358 317 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 ARSEP51690 589 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 OGDHQ02218 1023 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 SNCBQ16143 134 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 TMEM63BQ5T3F8 832 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 CEP57Q86XR8 500 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 SLITRK1Q96PX8 696 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 TGS1Q96RS0 853 aaKnown RBP15.41■□□□□ 0.06
ACTN1-211ENST00000553882 PAIP2Q9BPZ3 127 aaKnown RBP15.41■□□□□ 0.06
ACTN1-211ENST00000553882 IP6K2Q9UHH9 426 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 SLC12A4Q9UP95 1085 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 AGAP1Q9UPQ3 857 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 USP15Q9Y4E8 981 aaPredicted RBP15.41■□□□□ 0.06
ACTN1-211ENST00000553882 RASA4BC9J798 803 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 RASA4O43374 803 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 LIASO43766 372 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 UBOX5O94941 541 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 IFNB1P01574 187 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 SRGAP2CP0DJJ0 459 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 UBA1P22314 1058 aaKnown RBP15.41■□□□□ 0.06
ACTN1-211ENST00000553882 TGFB2P61812 414 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 PLCB3Q01970 1234 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 SWT1Q5T5J6 900 aaKnown RBP15.41■□□□□ 0.06
ACTN1-211ENST00000553882 TBC1D1Q86TI0 1168 aaPredicted RBP15.41■□□□□ 0.06
ACTN1-211ENST00000553882 FAM228AQ86W67 206 aa15.41■□□□□ 0.06
ACTN1-211ENST00000553882 SAE1Q9UBE0 346 aaPredicted RBP15.41■□□□□ 0.06
ACTN1-211ENST00000553882 TPX2Q9ULW0 747 aaKnown RBP15.41■□□□□ 0.06
ACTN1-211ENST00000553882 DOCK1Q14185 1865 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 TMEM191CA6NGB0 347 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 DNAJC8O75937 253 aaPredicted RBP15.4■□□□□ 0.06
ACTN1-211ENST00000553882 PIGRP01833 764 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 TMEM191BP0C7N4 346 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 ABCD1P33897 745 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 OSTNP61366 133 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 GPS1Q13098 491 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 DNAJC24Q6P3W2 148 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 TCP11Q8WWU5 503 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 PRPF31Q8WWY3 499 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms