RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 TANGO2Q6ICL3 276 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 TMEM132EQ6IEE7 984 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 GGT6Q6P531 493 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 CNKSR3Q6P9H4 555 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 PNPLA7Q6ZV29 1317 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 RFX8Q6ZV50 586 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 RNF44Q7L0R7 432 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 SUGP1Q8IWZ8 645 aaKnown RBP4.59□□□□□ -1.67
TDP1-207ENST00000553617 ADGRG2Q8IZP9 1017 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 CLASRPQ8N2M8 674 aaKnown RBP4.59□□□□□ -1.67
TDP1-207ENST00000553617 SDR16C5Q8N3Y7 309 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 NME8Q8N427 588 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 GLIS1Q8NBF1 620 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 OR5M3Q8NGP4 307 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 OR14K1Q8NGZ2 314 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 SLC35B2Q8TB61 432 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 FAM71BQ8TC56 605 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 RABGGTAQ92696 567 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 MUL1Q969V5 352 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 KRTAP4-7Q9BYR0 210 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 TMEM168Q9H0V1 697 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 TMEM8AQ9HCN3 771 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 NECTIN3Q9NQS3 549 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 ITM2CQ9NQX7 267 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 RRN3Q9NYV6 651 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 IGSF9Q9P2J2 1179 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 SLC45A2Q9UMX9 530 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 PLEKHM1Q9Y4G2 1056 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.59□□□□□ -1.67
TDP1-207ENST00000553617 C9orf118A6NHY6 69 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 AQP12BA6NM10 295 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 PODXLO00592 558 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 HAUS5O94927 633 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 NDST3O95803 873 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 AMHP03971 560 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 ANXA1P04083 346 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 A1BGP04217 495 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 ITGA5P08648 1049 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 SNRPA1P09661 255 aaKnown RBP4.58□□□□□ -1.68
TDP1-207ENST00000553617 BDNFP23560 247 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 IL1R2P27930 398 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 UCP3P55916 312 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 LMOD3Q0VAK6 560 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 PRKG1Q13976 671 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 RAB30Q15771 203 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 LIN54Q6MZP7 749 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 JMJD6Q6NYC1 403 aaPredicted RBP4.58□□□□□ -1.68
TDP1-207ENST00000553617 MZT2AQ6P582 158 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 KRT28Q7Z3Y7 464 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 DNAJC5GQ8N7S2 189 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 GPATCH11Q8N954 259 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 TXNDC5Q8NBS9 432 aaKnown RBP4.58□□□□□ -1.68
TDP1-207ENST00000553617 NLGN4YQ8NFZ3 816 aaPredicted RBP4.58□□□□□ -1.68
TDP1-207ENST00000553617 STT3BQ8TCJ2 826 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 DDX17Q92841 729 aaKnown RBP4.58□□□□□ -1.68
TDP1-207ENST00000553617 SCAMP4Q969E2 229 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 TRIM63Q969Q1 353 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 LTV1Q96GA3 475 aaPredicted RBP4.58□□□□□ -1.68
TDP1-207ENST00000553617 BORCS6Q96GS4 357 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 MPP4Q96JB8 637 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 RPL10LQ96L21 214 aaKnown RBP4.58□□□□□ -1.68
TDP1-207ENST00000553617 SIGLEC10Q96LC7 697 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 UBXN10Q96LJ8 280 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 SORBS1Q9BX66 1292 aaKnown RBP4.58□□□□□ -1.68
TDP1-207ENST00000553617 TINAGL1Q9GZM7 467 aaPredicted RBP4.58□□□□□ -1.68
TDP1-207ENST00000553617 BARX1Q9HBU1 254 aaPredicted RBP4.58□□□□□ -1.68
TDP1-207ENST00000553617 IL23AQ9NPF7 189 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 FAM53CQ9NYF3 392 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 MAP3K20Q9NYL2 800 aaKnown RBP4.58□□□□□ -1.68
TDP1-207ENST00000553617 RGL1Q9NZL6 768 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 NTMQ9P121 344 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 LRFN1Q9P244 771 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 ZNF212Q9UDV6 495 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.58□□□□□ -1.68
TDP1-207ENST00000553617 AGAP1Q9UPQ3 857 aa4.58□□□□□ -1.68
TDP1-207ENST00000553617 ARID1BQ8NFD5 2236 aaPredicted RBP4.58□□□□□ -1.68
TDP1-207ENST00000553617 B5MCH6 92 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 TRIM38O00635 465 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 KIAA0391O15091 583 aaKnown RBP4.57□□□□□ -1.68
TDP1-207ENST00000553617 GNAI2P04899 355 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 GRPP07492 148 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 FAM163BP0C2L3 166 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 PIM1P11309 404 aaPredicted RBP4.57□□□□□ -1.68
TDP1-207ENST00000553617 DDIT3P35638 169 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 PSMC1P62191 440 aaKnown RBP4.57□□□□□ -1.68
TDP1-207ENST00000553617 TBX2Q13207 712 aaPredicted RBP4.57□□□□□ -1.68
TDP1-207ENST00000553617 FZD5Q13467 585 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 RNF151Q2KHN1 245 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 CRB2Q5IJ48 1285 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 FAM26FQ5R3K3 315 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 INTS11Q5TA45 600 aaKnown RBP4.57□□□□□ -1.68
TDP1-207ENST00000553617 RRAGBQ5VZM2 374 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 ZNF529Q6P280 563 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 UBE3BQ7Z3V4 1068 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 PPP1R32Q7Z5V6 425 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 GALNT15Q8N3T1 639 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 SLC15A4Q8N697 577 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 PCSK9Q8NBP7 692 aaKnown RBP4.57□□□□□ -1.68
TDP1-207ENST00000553617 FBXO15Q8NCQ5 510 aaPredicted RBP4.57□□□□□ -1.68
TDP1-207ENST00000553617 TMIEQ8NEW7 156 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms