RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 CERS5Q8N5B7 392 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 METTL13Q8N6R0 699 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 SLC30A5Q8TAD4 765 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 MICAL1Q8TDZ2 1067 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 ZNF669Q96BR6 464 aaPredicted RBP6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 EIF2AK1Q9BQI3 630 aaKnown RBP6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 REEP2Q9BRK0 252 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 SIX2Q9NPC8 291 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 EHD2Q9NZN4 543 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 USP21Q9UK80 565 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 AMFRQ9UKV5 643 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 VAV3Q9UKW4 847 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 PLAAQ9Y263 795 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 RABGAP1Q9Y3P9 1069 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 GREB1LQ9C091 1923 aaPredicted RBP6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 NCANO14594 1321 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 QSER1Q2KHR3 1735 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 B2RBV5 119 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 F8W031 263 aaPredicted RBP6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 H0YGN5 161 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 KRIT1O00522 736 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 DDX3XO00571 662 aaKnown RBP eCLIP6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 MSH4O15457 936 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 SART1O43290 800 aaKnown RBP6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 RNGTTO60942 597 aaKnown RBP6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 KIAA0754O94854 1291 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 GCNT3O95395 438 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 FAM153BP0C7A2 387 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 TMEM253P0C7T8 217 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 ACTN1P12814 892 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 HSPA6P17066 643 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 TNFAIP3P21580 790 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 GBP1P32455 592 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 LSP1P33241 339 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 HSD17B3P37058 310 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 USP8P40818 1118 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 ASPAP45381 313 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 GUCY2FP51841 1108 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 CDR1P51861 262 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 DRG2P55039 364 aaKnown RBP6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 HADHBP55084 474 aaKnown RBP6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 EIF3BP55884 814 aaKnown RBP6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 SNRPFP62306 86 aaKnown RBP6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 PSMC6P62333 389 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 MRPS25P82663 173 aaKnown RBP6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 ITGB3BPQ13352 177 aaPredicted RBP6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 PPP2R5CQ13362 524 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 DRP2Q13474 957 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 HLTFQ14527 1009 aaKnown RBP eCLIP6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 ZYXQ15942 572 aaKnown RBP6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 PTGISQ16647 500 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 FAM153CQ494X1 144 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 CEP85LQ5SZL2 805 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 STRIP1Q5VSL9 837 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 RINT1Q6NUQ1 792 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 C1orf186Q6ZWK4 172 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 OTOP1Q7RTM1 612 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 ARMC9Q7Z3E5 817 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 NT5DC3Q86UY8 548 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 CLEC10AQ8IUN9 316 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 SIAH1Q8IUQ4 282 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 SUGP1Q8IWZ8 645 aaKnown RBP6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 KLHL7Q8IXQ5 586 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 FAM186BQ8IYM0 893 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 TMEM130Q8N3G9 435 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 MORC4Q8TE76 937 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 SH3TC2Q8TF17 1288 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 TMEM174Q8WUU8 243 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 SEC14L1Q92503 715 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 GJA10Q969M2 543 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 SLC35C1Q96A29 364 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 LENG9Q96B70 501 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 SCARF2Q96GP6 870 aaPredicted RBP6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 HES6Q96HZ4 224 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 CCDC74BQ96LY2 380 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 RUNDC3BQ96NL0 473 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 NACC1Q96RE7 527 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 HSD17B14Q9BPX1 270 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 PACSIN1Q9BY11 444 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 RAB17Q9H0T7 212 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 DMAC2Q9NW81 257 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 FAM153AQ9UHL3 310 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 ODF2LQ9ULJ1 636 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 UTP11Q9Y3A2 253 aaKnown RBP6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 NFS1Q9Y697 457 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 LTBP4Q8N2S1 1624 aa6.45□□□□□ -1.38
CHMP4A-210ENST00000552620 GOLGA6L10A0A0M3HER8 536 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 FAM86C2PA6NEL3 165 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 TMCO5BA8MYB1 307 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 MIF4GDA9UHW6 222 aaKnown RBP6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 UPK3BL1B0FP48 263 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 UPK3BL2E5RIL1 263 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 FAM86B1E9PN63 330 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 FAM229AH3BQW9 127 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 MEIS1O00470 390 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 RGS13O14921 159 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 P4HA2O15460 535 aa6.44□□□□□ -1.38
CHMP4A-210ENST00000552620 MEFVO15553 781 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms