RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ERLIN2O94905 339 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 TOP3BO95985 862 aaKnown RBP5.97□□□□□ -1.45
HOXB3-213ENST00000552000 RHOP08100 348 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 POU2F2P09086 479 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 ZNF806P0C7X5 589 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 CHRNB1P11230 501 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 GSPT1P15170 499 aaKnown RBP5.97□□□□□ -1.45
HOXB3-213ENST00000552000 AKAP5P24588 427 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 CCNE1P24864 410 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 ADH6P28332 368 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 MSX1P28360 303 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 GDI1P31150 447 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 CNR2P34972 360 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 NOVA1P51513 510 aaKnown RBP5.97□□□□□ -1.45
HOXB3-213ENST00000552000 NPEPPSP55786 919 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 LAMTOR4Q0VGL1 99 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 HSP90AA2PQ14568 343 aaPredicted RBP5.97□□□□□ -1.45
HOXB3-213ENST00000552000 AXDND1Q5T1B0 1012 aaPredicted RBP5.97□□□□□ -1.45
HOXB3-213ENST00000552000 NOTUMQ6P988 496 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 APOA5Q6Q788 366 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 LRSAM1Q6UWE0 723 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 SGMS1Q86VZ5 419 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 LONP2Q86WA8 852 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 KRTAP19-1Q8IUB9 90 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 SPEM1Q8N4L4 309 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 RNF149Q8NC42 400 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 LNX1Q8TBB1 728 aaPredicted RBP5.97□□□□□ -1.45
HOXB3-213ENST00000552000 PRPF31Q8WWY3 499 aaKnown RBP5.97□□□□□ -1.45
HOXB3-213ENST00000552000 ELSPBP1Q96BH3 223 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 TCEAL4Q96EI5 215 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 CCDC136Q96JN2 1154 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 JPH2Q9BR39 696 aaPredicted RBP5.97□□□□□ -1.45
HOXB3-213ENST00000552000 PAAF1Q9BRP4 392 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 TRMT61BQ9BVS5 477 aaKnown RBP5.97□□□□□ -1.45
HOXB3-213ENST00000552000 LSM14BQ9BX40 385 aaKnown RBP5.97□□□□□ -1.45
HOXB3-213ENST00000552000 RWDD1Q9H446 243 aaPredicted RBP5.97□□□□□ -1.45
HOXB3-213ENST00000552000 NXF3Q9H4D5 531 aaKnown RBP5.97□□□□□ -1.45
HOXB3-213ENST00000552000 SMOC1Q9H4F8 434 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 C6orf50Q9HD87 102 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 RBM12Q9NTZ6 932 aaKnown RBP5.97□□□□□ -1.45
HOXB3-213ENST00000552000 C2orf42Q9NWW7 574 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 GDE1Q9NZC3 331 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 KLK14Q9P0G3 267 aa5.97□□□□□ -1.45
HOXB3-213ENST00000552000 COL4A2P08572 1712 aa5.96□□□□□ -1.45
HOXB3-213ENST00000552000 TENM4Q6N022 2769 aa5.96□□□□□ -1.45
HOXB3-213ENST00000552000 ESYT2A0FGR8 921 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 CASTOR2A6NHX0 329 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 GOLGA8AA7E2F4 631 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 GOLGA8BA8MQT2 603 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 INO80B-WBP1J3KQ70 363 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 SLC27A2O14975 620 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 ZBTB43O43298 467 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 DYRK3O43781 588 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 EDIL3O43854 480 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 TSPAN1O60635 241 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 PSMD10O75832 226 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 KIF4AO95239 1232 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 NPTXRO95502 500 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 IGHDP01880 384 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 FCARP24071 287 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 CDC27P30260 824 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 OR1D2P34982 312 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 VIPR2P41587 438 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 RING1Q06587 406 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 ZNF252P-AS1Q0IIN9 211 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 GRIK3Q13003 919 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 RAB33AQ14088 237 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 PFKFB3Q16875 520 aaPredicted RBP5.96□□□□□ -1.46
HOXB3-213ENST00000552000 UVSSAQ2YD98 709 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 FOXD4L6Q3SYB3 417 aaPredicted RBP5.96□□□□□ -1.46
HOXB3-213ENST00000552000 C4orf17Q53FE4 359 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 PRRT3Q5FWE3 981 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 FAM78AQ5JUQ0 283 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 TTC22Q5TAA0 569 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 RNF43Q68DV7 783 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 TCEAL6Q6IPX3 200 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 FOXD4L3Q6VB84 417 aaPredicted RBP5.96□□□□□ -1.46
HOXB3-213ENST00000552000 Q6ZS52 159 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 ANO5Q75V66 913 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 CDR2LQ86X02 465 aaPredicted RBP5.96□□□□□ -1.46
HOXB3-213ENST00000552000 MAP4K3Q8IVH8 894 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 GSTCDQ8NEC7 633 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 RDM1Q8NG50 284 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 PSPC1Q8WXF1 523 aaKnown RBP5.96□□□□□ -1.46
HOXB3-213ENST00000552000 SLC7A3Q8WY07 619 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 ZCCHC14Q8WYQ9 949 aaKnown RBP5.96□□□□□ -1.46
HOXB3-213ENST00000552000 TCEAL3Q969E4 200 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 CCDC51Q96ER9 411 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 TCEANC2Q96MN5 208 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 TRIM6Q9C030 488 aaPredicted RBP5.96□□□□□ -1.46
HOXB3-213ENST00000552000 ZMYND12Q9H0C1 365 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 CSRNP2Q9H175 543 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 ZFP14Q9HCL3 533 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 ZNF334Q9HCZ1 680 aaPredicted RBP5.96□□□□□ -1.46
HOXB3-213ENST00000552000 PARP2Q9UGN5 583 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 BRPF3Q9ULD4 1205 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 NAP1L2Q9ULW6 460 aaPredicted RBP5.96□□□□□ -1.46
HOXB3-213ENST00000552000 GIT1Q9Y2X7 761 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 SHROOM3Q8TF72 1996 aa5.96□□□□□ -1.46
HOXB3-213ENST00000552000 WDR27A2RRH5 827 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms