RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 WDR44Q5JSH3 913 aa23.04■■□□□ 1.28
NEK3-202ENST00000550841 RIN2Q8WYP3 895 aaPredicted RBP23.04■■□□□ 1.28
NEK3-202ENST00000550841 EMILIN2Q9BXX0 1053 aa23.04■■□□□ 1.28
NEK3-202ENST00000550841 OXCT2Q9BYC2 517 aaPredicted RBP23.04■■□□□ 1.28
NEK3-202ENST00000550841 CBX8Q9HC52 389 aa23.04■■□□□ 1.28
NEK3-202ENST00000550841 SNX9Q9Y5X1 595 aa23.04■■□□□ 1.28
NEK3-202ENST00000550841 CLSTN1O94985 981 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 CYP11A1P05108 521 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 TKTP29401 623 aaKnown RBP23.03■■□□□ 1.28
NEK3-202ENST00000550841 MYL7Q01449 175 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 IQCB1Q15051 598 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 CCDC85BQ15834 202 aaPredicted RBP23.03■■□□□ 1.28
NEK3-202ENST00000550841 WDR72Q3MJ13 1102 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 CBWD6Q4V339 395 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 HSP90AA4PQ58FG1 418 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 ZNF667Q5HYK9 610 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 CBWD3Q5JTY5 395 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 CBWD5Q5RIA9 395 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 PLPP4Q5VZY2 271 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 TMEM86AQ8N2M4 240 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 TOP6BLQ8N6T0 577 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 SPATA18Q8TC71 538 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 FAM200AQ8TCP9 573 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 TAS1R2Q8TE23 839 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 PIK3R5Q8WYR1 880 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 FAXDC2Q96IV6 333 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 XYLT2Q9H1B5 865 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 MTCH2Q9Y6C9 303 aa23.03■■□□□ 1.28
NEK3-202ENST00000550841 GOLGA6L19H0YKK7 550 aa23.02■■□□□ 1.28
NEK3-202ENST00000550841 LILRB3O75022 631 aa23.02■■□□□ 1.28
NEK3-202ENST00000550841 ASS1P00966 412 aaKnown RBP23.02■■□□□ 1.28
NEK3-202ENST00000550841 YWHAHQ04917 246 aaPredicted RBP23.02■■□□□ 1.28
NEK3-202ENST00000550841 PTPN14Q15678 1187 aa23.02■■□□□ 1.28
NEK3-202ENST00000550841 VWA3BQ502W6 1294 aa23.02■■□□□ 1.28
NEK3-202ENST00000550841 SCARA3Q6AZY7 606 aa23.02■■□□□ 1.28
NEK3-202ENST00000550841 THEM5Q8N1Q8 247 aa23.02■■□□□ 1.28
NEK3-202ENST00000550841 ATXN2LQ8WWM7 1075 aaKnown RBP23.02■■□□□ 1.28
NEK3-202ENST00000550841 NSUN3Q9H649 340 aaKnown RBP23.02■■□□□ 1.28
NEK3-202ENST00000550841 RXFP1Q9HBX9 757 aa23.02■■□□□ 1.28
NEK3-202ENST00000550841 PRDM6Q9NQX0 595 aa23.02■■□□□ 1.28
NEK3-202ENST00000550841 FNIP2Q9P278 1114 aa23.02■■□□□ 1.28
NEK3-202ENST00000550841 BACE2Q9Y5Z0 518 aa23.02■■□□□ 1.28
NEK3-202ENST00000550841 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.01■■□□□ 1.27
NEK3-202ENST00000550841 FSD2A1L4K1 749 aa23.01■■□□□ 1.27
NEK3-202ENST00000550841 C2orf71A6NGG8 1288 aa23.01■■□□□ 1.27
NEK3-202ENST00000550841 C2CD2LO14523 706 aa23.01■■□□□ 1.27
NEK3-202ENST00000550841 OAZ2O95190 189 aa23.01■■□□□ 1.27
NEK3-202ENST00000550841 ZNF18P17022 549 aa23.01■■□□□ 1.27
NEK3-202ENST00000550841 IRS1P35568 1242 aa23.01■■□□□ 1.27
NEK3-202ENST00000550841 MRPL58Q14197 206 aaKnown RBP23.01■■□□□ 1.27
NEK3-202ENST00000550841 ADGRE1Q14246 886 aa23.01■■□□□ 1.27
NEK3-202ENST00000550841 RTP2Q5QGT7 225 aa23.01■■□□□ 1.27
NEK3-202ENST00000550841 VARS2Q5ST30 1063 aaKnown RBP23.01■■□□□ 1.27
NEK3-202ENST00000550841 LNX1Q8TBB1 728 aaPredicted RBP23.01■■□□□ 1.27
NEK3-202ENST00000550841 B3GALT6Q96L58 329 aa23.01■■□□□ 1.27
NEK3-202ENST00000550841 MMS19Q96T76 1030 aa23.01■■□□□ 1.27
NEK3-202ENST00000550841 CDCA3Q99618 268 aaPredicted RBP23.01■■□□□ 1.27
NEK3-202ENST00000550841 NDST4Q9H3R1 872 aa23.01■■□□□ 1.27
NEK3-202ENST00000550841 NXF1Q9UBU9 619 aaKnown RBP23.01■■□□□ 1.27
NEK3-202ENST00000550841 LIMA1Q9UHB6 759 aaKnown RBP23.01■■□□□ 1.27
NEK3-202ENST00000550841 EYSQ5T1H1 3165 aa23■■□□□ 1.27
NEK3-202ENST00000550841 GTPBP10A4D1E9 387 aaKnown RBP23■■□□□ 1.27
NEK3-202ENST00000550841 LRRC10BA6NIK2 292 aa23■■□□□ 1.27
NEK3-202ENST00000550841 LHX1P48742 406 aa23■■□□□ 1.27
NEK3-202ENST00000550841 PSMD5Q16401 504 aa23■■□□□ 1.27
NEK3-202ENST00000550841 OVOS1Q6IE37 1185 aa23■■□□□ 1.27
NEK3-202ENST00000550841 PPFIBP1Q86W92 1011 aa23■■□□□ 1.27
NEK3-202ENST00000550841 EHBP1Q8NDI1 1231 aa23■■□□□ 1.27
NEK3-202ENST00000550841 TLE6Q9H808 572 aa23■■□□□ 1.27
NEK3-202ENST00000550841 THEGQ9P2T0 379 aa23■■□□□ 1.27
NEK3-202ENST00000550841 CUL9Q8IWT3 2517 aa22.99■■□□□ 1.27
NEK3-202ENST00000550841 PES1O00541 588 aaKnown RBP22.99■■□□□ 1.27
NEK3-202ENST00000550841 NCK2O43639 380 aa22.99■■□□□ 1.27
NEK3-202ENST00000550841 CSPG5O95196 566 aa22.99■■□□□ 1.27
NEK3-202ENST00000550841 NOP14P78316 857 aaKnown RBP22.99■■□□□ 1.27
NEK3-202ENST00000550841 KRT31Q15323 416 aa22.99■■□□□ 1.27
NEK3-202ENST00000550841 CTXN3Q4LDR2 81 aa22.99■■□□□ 1.27
NEK3-202ENST00000550841 WSCD1Q658N2 575 aa22.99■■□□□ 1.27
NEK3-202ENST00000550841 ZNF280DQ6N043 979 aa22.99■■□□□ 1.27
NEK3-202ENST00000550841 GBP6Q6ZN66 633 aa22.99■■□□□ 1.27
NEK3-202ENST00000550841 LIMS2Q7Z4I7 341 aa22.99■■□□□ 1.27
NEK3-202ENST00000550841 AUTS2Q8WXX7 1259 aa22.99■■□□□ 1.27
NEK3-202ENST00000550841 SEMA4DQ92854 862 aa22.99■■□□□ 1.27
NEK3-202ENST00000550841 MTRRQ9UBK8 725 aa22.99■■□□□ 1.27
NEK3-202ENST00000550841 TIMM13Q9Y5L4 95 aaPredicted RBP22.99■■□□□ 1.27
NEK3-202ENST00000550841 COL4A4P53420 1690 aaPredicted RBP22.98■■□□□ 1.27
NEK3-202ENST00000550841 OR6C75A6NL08 312 aa22.98■■□□□ 1.27
NEK3-202ENST00000550841 HIDE1A8MVS5 230 aa22.98■■□□□ 1.27
NEK3-202ENST00000550841 TACC1O75410 805 aa22.98■■□□□ 1.27
NEK3-202ENST00000550841 C1RP00736 705 aa22.98■■□□□ 1.27
NEK3-202ENST00000550841 ADH1AP07327 375 aa22.98■■□□□ 1.27
NEK3-202ENST00000550841 KLRC2P26717 231 aa22.98■■□□□ 1.27
NEK3-202ENST00000550841 NDUFV1P49821 464 aa22.98■■□□□ 1.27
NEK3-202ENST00000550841 SOWAHAQ2M3V2 549 aa22.98■■□□□ 1.27
NEK3-202ENST00000550841 PRSS55Q6UWB4 352 aaPredicted RBP22.98■■□□□ 1.27
NEK3-202ENST00000550841 LUZP1Q86V48 1076 aa22.98■■□□□ 1.27
NEK3-202ENST00000550841 PDCL2Q8N4E4 241 aa22.98■■□□□ 1.27
NEK3-202ENST00000550841 KLHL5Q96PQ7 755 aa22.98■■□□□ 1.27
NEK3-202ENST00000550841 PI4K2AQ9BTU6 479 aa22.98■■□□□ 1.27
NEK3-202ENST00000550841 HSD3B7Q9H2F3 369 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms