RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 TNNI1P19237 187 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 HSPA9P38646 679 aaKnown RBP4.66□□□□□ -1.66
CCDC59-204ENST00000550589 NAMPTP43490 491 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 RWDD2BP57060 319 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 PTENP60484 403 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 CDR2Q01850 454 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 CALCOCO2Q13137 446 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 IER5Q5VY09 327 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 SWSAP1Q6NVH7 229 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 GJB7Q6PEY0 223 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 CATSPERGQ6ZRH7 1159 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 SYDE1Q6ZW31 735 aaPredicted RBP4.66□□□□□ -1.66
CCDC59-204ENST00000550589 IQCKQ8N0W5 287 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 C3orf20Q8ND61 904 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.66□□□□□ -1.66
CCDC59-204ENST00000550589 LMO3Q8TAP4 145 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 DEPTORQ8TB45 409 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 LNX1Q8TBB1 728 aaPredicted RBP4.66□□□□□ -1.66
CCDC59-204ENST00000550589 SHC3Q92529 594 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 CCDC127Q96BQ5 260 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 ATG4CQ96DT6 458 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 VCPIP1Q96JH7 1222 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 FAM167AQ96KS9 214 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 MFSD14AQ96MC6 490 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 FBXL18Q96ME1 805 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 FMO2Q99518 471 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 GLIS2Q9BZE0 524 aaPredicted RBP4.66□□□□□ -1.66
CCDC59-204ENST00000550589 THAP2Q9H0W7 228 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 AZI2Q9H6S1 392 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 CNOT10Q9H9A5 744 aaKnown RBP4.66□□□□□ -1.66
CCDC59-204ENST00000550589 POLD4Q9HCU8 107 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 NEUROD4Q9HD90 331 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 ZNF302Q9NR11 478 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 COL20A1Q9P218 1284 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 PPP1R1BQ9UD71 204 aaPredicted RBP4.66□□□□□ -1.66
CCDC59-204ENST00000550589 ADAMTS5Q9UNA0 930 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 STXBP5LQ9Y2K9 1186 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 SCINQ9Y6U3 715 aa4.66□□□□□ -1.66
CCDC59-204ENST00000550589 AGPSO00116 658 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 FZD9O00144 591 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 TNFRSF10BO14763 440 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 SHOX2O60902 331 aaPredicted RBP4.65□□□□□ -1.67
CCDC59-204ENST00000550589 KIAA0754O94854 1291 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 MYBL2P10244 700 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 DLATP10515 647 aaKnown RBP4.65□□□□□ -1.67
CCDC59-204ENST00000550589 KRT5P13647 590 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 CYP11B1P15538 503 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 TAL1P17542 331 aaPredicted RBP4.65□□□□□ -1.67
CCDC59-204ENST00000550589 NR1D1P20393 614 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 ATP5DP30049 168 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 ICAM3P32942 547 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 NSFP46459 744 aaKnown RBP4.65□□□□□ -1.67
CCDC59-204ENST00000550589 FNTAP49354 379 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 GMPSP49915 693 aaPredicted RBP4.65□□□□□ -1.67
CCDC59-204ENST00000550589 GUCY2FP51841 1108 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 EFNA5P52803 228 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 GYS2P54840 703 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 MAP2K1Q02750 393 aaPredicted RBP4.65□□□□□ -1.67
CCDC59-204ENST00000550589 CAV1Q03135 178 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 LMNB2Q03252 620 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 PPP3CAQ08209 521 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 C11orf91Q3C1V1 193 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 CEP85LQ5SZL2 805 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 EMC10Q5UCC4 262 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 ACAD10Q6JQN1 1059 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 SLC30A10Q6XR72 485 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 ANO5Q75V66 913 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 CYFIP1Q7L576 1253 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 TRMT1LQ7Z2T5 733 aaKnown RBP4.65□□□□□ -1.67
CCDC59-204ENST00000550589 RAB44Q7Z6P3 723 aaPredicted RBP4.65□□□□□ -1.67
CCDC59-204ENST00000550589 KSR1Q8IVT5 923 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 CCDC105Q8IYK2 499 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 BBOF1Q8ND07 529 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 ZNF564Q8TBZ8 553 aaPredicted RBP4.65□□□□□ -1.67
CCDC59-204ENST00000550589 CCHCR1Q8TD31 782 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 BCAS4Q8TDM0 211 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 UBLCP1Q8WVY7 318 aaPredicted RBP4.65□□□□□ -1.67
CCDC59-204ENST00000550589 TCP11Q8WWU5 503 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 SEC14L1Q92503 715 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 ATP6V1G3Q96LB4 118 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 ZIM3Q96PE6 472 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 ERP44Q9BS26 406 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 SYT11Q9BT88 431 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 AP1M1Q9BXS5 423 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 DDX47Q9H0S4 455 aaKnown RBP4.65□□□□□ -1.67
CCDC59-204ENST00000550589 OSGEPQ9NPF4 335 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 CYP39A1Q9NYL5 469 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 AMACRQ9UHK6 382 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 GDF2Q9UK05 429 aaPredicted RBP4.65□□□□□ -1.67
CCDC59-204ENST00000550589 CEP83Q9Y592 693 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 CSADQ9Y600 493 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 PASKQ96RG2 1323 aa4.65□□□□□ -1.67
CCDC59-204ENST00000550589 SIPA1L1O43166 1804 aa4.64□□□□□ -1.67
CCDC59-204ENST00000550589 SCN9AQ15858 1988 aa4.64□□□□□ -1.67
CCDC59-204ENST00000550589 LOC102724159A0A0B4J2E5 919 aa4.64□□□□□ -1.67
CCDC59-204ENST00000550589 NDUFAB1O14561 156 aa4.64□□□□□ -1.67
CCDC59-204ENST00000550589 EIF3HO15372 352 aaKnown RBP eCLIP4.64□□□□□ -1.67
CCDC59-204ENST00000550589 CLDN3O15551 220 aa4.64□□□□□ -1.67
CCDC59-204ENST00000550589 ATP9AO75110 1047 aa4.64□□□□□ -1.67
CCDC59-204ENST00000550589 PHF2O75151 1096 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms