RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 MAGEC1O60732 1142 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 PDGFRBP09619 1106 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 XPAP23025 273 aaPredicted RBP9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 TKTP29401 623 aaKnown RBP9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 FAM45BPQ6NSW5 357 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 KBTBD8Q8NFY9 601 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 KRT35Q92764 455 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 FAF2Q96CS3 445 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 OXNAD1Q96HP4 312 aaPredicted RBP9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 ZSCAN10Q96SZ4 725 aaPredicted RBP9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 UBXN6Q9BZV1 441 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 PREBQ9HCU5 417 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 TRIM10Q9UDY6 481 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 MKLN1Q9UL63 735 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 NOS1P29475 1434 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 ABL2P42684 1182 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 FXR1P51114 621 aaKnown RBP eCLIP9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 ZNF200P98182 395 aaPredicted RBP9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 SF3B3Q15393 1217 aaKnown RBP9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 ZNF423Q2M1K9 1284 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 FRMD5Q7Z6J6 570 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 OR8H2Q8N162 312 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 LCORLQ8N3X6 602 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 AMER2Q8N7J2 671 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 PRCCQ92733 491 aaPredicted RBP9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 VPS39Q96JC1 886 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 REXO4Q9GZR2 422 aaKnown RBP9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 SLC6A15Q9H2J7 730 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 EPB41L4AQ9HCS5 686 aaPredicted RBP9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 PARVAQ9NVD7 372 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 RAPGEFL1Q9UHV5 662 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 VPS4AQ9UN37 437 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 ADGRA2Q96PE1 1338 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 FAM172BPA6NC97 362 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 TMEM114B3SHH9 223 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 MED7O43513 233 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 SIN3BO75182 1162 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 CAMTA2O94983 1202 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 SEMA3DO95025 777 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 SLC1A4P43007 532 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 HK2P52789 917 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 ZC3H12BQ5HYM0 836 aaKnown RBP9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 ENOSF1Q7L5Y1 443 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 CCDC60Q8IWA6 550 aaPredicted RBP9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 DENND6AQ8IWF6 608 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 SMYD4Q8IYR2 804 aaPredicted RBP9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 NCLNQ969V3 563 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 RBM15Q96T37 977 aaKnown RBP eCLIP9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 TBC1D10AQ9BXI6 508 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 IP6K2Q9UHH9 426 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 MYO3BQ8WXR4 1341 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 USP42Q9H9J4 1324 aaKnown RBP9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 WASLO00401 505 aaPredicted RBP9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 CCNCP24863 283 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 TRIQKQ629K1 86 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 RCOR2Q8IZ40 523 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 BLOC1S5Q8TDH9 187 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 RORBQ92753 470 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 ADAM22Q9P0K1 906 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 LRRC42Q9Y546 428 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 PRDM1O75626 825 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 TOMM70O94826 608 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 EPN2O95208 641 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 ZNF24P17028 368 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 ATF4P18848 351 aaPredicted RBP9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 ATP2B4P23634 1241 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 PRCPP42785 496 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 AKR1D1P51857 326 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 ABRAXAS1Q6UWZ7 409 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 CAMK1DQ8IU85 385 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 P3H2Q8IVL5 708 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 ASAP1Q9ULH1 1129 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 ABCA10Q8WWZ4 1543 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 KIAA0586Q9BVV6 1533 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 FLT4P35916 1363 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 F8W810 466 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 OPLAHO14841 1288 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 CCNKO75909 580 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 FARP2O94887 1054 aaPredicted RBP9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 CALB1P05937 261 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 CYP21A2P08686 494 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 NUP62P37198 522 aaPredicted RBP9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 COILP38432 576 aaPredicted RBP9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 POLA2Q14181 598 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 QPRTQ15274 297 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 UBE3CQ15386 1083 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 BICRALQ6AI39 1079 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 STRA8Q7Z7C7 330 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 TMIEQ8NEW7 156 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 AFG1LQ8WV93 481 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 METTL22Q9BUU2 404 aaPredicted RBP9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 SLC12A6Q9UHW9 1150 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 DENND2AQ9ULE3 1009 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 TTC37Q6PGP7 1564 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 A6NJR5 290 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 AP5Z1O43299 807 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 RTN2O75298 545 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 NPR1P16066 1061 aa9.16□□□□□ -0.94
PPFIA2-220ENST00000550584 F8A1P23610 371 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms