RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 TSSK4Q6SA08 328 aa23.56■■□□□ 1.36
SMARCC2-210ENST00000550519 CD302Q8IX05 232 aa23.56■■□□□ 1.36
SMARCC2-210ENST00000550519 MYCT1Q8N699 235 aa23.56■■□□□ 1.36
SMARCC2-210ENST00000550519 FAM3CQ92520 227 aa23.56■■□□□ 1.36
SMARCC2-210ENST00000550519 E2F7Q96AV8 911 aa23.56■■□□□ 1.36
SMARCC2-210ENST00000550519 CALML4Q96GE6 196 aa23.56■■□□□ 1.36
SMARCC2-210ENST00000550519 FIZ1Q96SL8 496 aa23.56■■□□□ 1.36
SMARCC2-210ENST00000550519 EPC1Q9H2F5 836 aa23.56■■□□□ 1.36
SMARCC2-210ENST00000550519 PARVGQ9HBI0 331 aa23.56■■□□□ 1.36
SMARCC2-210ENST00000550519 CPSF3Q9UKF6 684 aaKnown RBP23.56■■□□□ 1.36
SMARCC2-210ENST00000550519 PIAS3Q9Y6X2 628 aa23.56■■□□□ 1.36
SMARCC2-210ENST00000550519 HEPACAM2A8MVW5 462 aa23.55■■□□□ 1.36
SMARCC2-210ENST00000550519 K7ENM7 598 aa23.55■■□□□ 1.36
SMARCC2-210ENST00000550519 ZNF263O14978 683 aa23.55■■□□□ 1.36
SMARCC2-210ENST00000550519 TRAK2O60296 914 aa23.55■■□□□ 1.36
SMARCC2-210ENST00000550519 FAM13AO94988 1023 aa23.55■■□□□ 1.36
SMARCC2-210ENST00000550519 EPHB3P54753 998 aa23.55■■□□□ 1.36
SMARCC2-210ENST00000550519 LILRA4P59901 499 aa23.55■■□□□ 1.36
SMARCC2-210ENST00000550519 DHX8Q14562 1220 aaKnown RBP23.55■■□□□ 1.36
SMARCC2-210ENST00000550519 PUM1Q14671 1186 aaKnown RBP eCLIP23.55■■□□□ 1.368e-13■□□□□ 8.2
SMARCC2-210ENST00000550519 SLC39A4Q6P5W5 647 aa23.55■■□□□ 1.36
SMARCC2-210ENST00000550519 IER2Q9BTL4 223 aa23.55■■□□□ 1.36
SMARCC2-210ENST00000550519 FAM126AQ9BYI3 521 aaPredicted RBP23.55■■□□□ 1.36
SMARCC2-210ENST00000550519 DLL3Q9NYJ7 618 aa23.55■■□□□ 1.36
SMARCC2-210ENST00000550519 COL4A2P08572 1712 aa23.54■■□□□ 1.36
SMARCC2-210ENST00000550519 A0A1W2PRU2 124 aa23.54■■□□□ 1.36
SMARCC2-210ENST00000550519 MTMR11A4FU01 709 aa23.54■■□□□ 1.36
SMARCC2-210ENST00000550519 TDGF1P13385 188 aa23.54■■□□□ 1.36
SMARCC2-210ENST00000550519 PAX3P23760 479 aa23.54■■□□□ 1.36
SMARCC2-210ENST00000550519 ALDH1A3P47895 512 aa23.54■■□□□ 1.36
SMARCC2-210ENST00000550519 MLLT6P55198 1093 aaPredicted RBP23.54■■□□□ 1.36
SMARCC2-210ENST00000550519 MCM6Q14566 821 aa23.54■■□□□ 1.36
SMARCC2-210ENST00000550519 JADE1Q6IE81 842 aa23.54■■□□□ 1.36
SMARCC2-210ENST00000550519 ATAD1Q8NBU5 361 aa23.54■■□□□ 1.36
SMARCC2-210ENST00000550519 RSPRY1Q96DX4 576 aa23.54■■□□□ 1.36
SMARCC2-210ENST00000550519 SENP8Q96LD8 212 aa23.54■■□□□ 1.36
SMARCC2-210ENST00000550519 MSTO1Q9BUK6 570 aa23.54■■□□□ 1.36
SMARCC2-210ENST00000550519 SLITRK6Q9H5Y7 841 aa23.54■■□□□ 1.36
SMARCC2-210ENST00000550519 NCDNQ9UBB6 729 aa23.54■■□□□ 1.36
SMARCC2-210ENST00000550519 SLC27A5Q9Y2P5 690 aa23.54■■□□□ 1.36
SMARCC2-210ENST00000550519 ASB3Q9Y575 518 aa23.54■■□□□ 1.36
SMARCC2-210ENST00000550519 ODC1P11926 461 aa23.53■■□□□ 1.36
SMARCC2-210ENST00000550519 PLCG1P19174 1290 aa23.53■■□□□ 1.36
SMARCC2-210ENST00000550519 GTF2BQ00403 316 aa23.53■■□□□ 1.36
SMARCC2-210ENST00000550519 GRIN1Q05586 938 aa23.53■■□□□ 1.36
SMARCC2-210ENST00000550519 C9orf57Q5W0N0 161 aa23.53■■□□□ 1.36
SMARCC2-210ENST00000550519 DGLUCYQ7Z3D6 616 aa23.53■■□□□ 1.36
SMARCC2-210ENST00000550519 RAD54LQ92698 747 aa23.53■■□□□ 1.36
SMARCC2-210ENST00000550519 TMEM209Q96SK2 561 aa23.53■■□□□ 1.36
SMARCC2-210ENST00000550519 LMAN1LQ9HAT1 526 aa23.53■■□□□ 1.36
SMARCC2-210ENST00000550519 HSFX1Q9UBD0 423 aa23.53■■□□□ 1.36
SMARCC2-210ENST00000550519 SMG5Q9UPR3 1016 aaKnown RBP23.53■■□□□ 1.36
SMARCC2-210ENST00000550519 ANO9A1A5B4 782 aa23.52■■□□□ 1.36
SMARCC2-210ENST00000550519 PIRO00625 290 aa23.52■■□□□ 1.36
SMARCC2-210ENST00000550519 BMP15O95972 392 aa23.52■■□□□ 1.36
SMARCC2-210ENST00000550519 NFICP08651 508 aa23.52■■□□□ 1.36
SMARCC2-210ENST00000550519 CHRNB1P11230 501 aa23.52■■□□□ 1.36
SMARCC2-210ENST00000550519 ABCD1P33897 745 aa23.52■■□□□ 1.36
SMARCC2-210ENST00000550519 LONP1P36776 959 aaKnown RBP23.52■■□□□ 1.36
SMARCC2-210ENST00000550519 FCHO2Q0JRZ9 810 aa23.52■■□□□ 1.36
SMARCC2-210ENST00000550519 KARSQ15046 597 aaKnown RBP23.52■■□□□ 1.36
SMARCC2-210ENST00000550519 GAREM2Q75VX8 874 aa23.52■■□□□ 1.36
SMARCC2-210ENST00000550519 DNAJB7Q7Z6W7 309 aaPredicted RBP23.52■■□□□ 1.36
SMARCC2-210ENST00000550519 TTC9BQ8N6N2 239 aa23.52■■□□□ 1.36
SMARCC2-210ENST00000550519 PSMG2Q969U7 264 aa23.52■■□□□ 1.36
SMARCC2-210ENST00000550519 FAM212AQ96EL1 285 aa23.52■■□□□ 1.36
SMARCC2-210ENST00000550519 MKNK1Q9BUB5 465 aa23.52■■□□□ 1.36
SMARCC2-210ENST00000550519 SMC3Q9UQE7 1217 aa23.52■■□□□ 1.36
SMARCC2-210ENST00000550519 DERAQ9Y315 318 aa23.52■■□□□ 1.36
SMARCC2-210ENST00000550519 DNAH14Q0VDD8 3507 aa23.51■■□□□ 1.35
SMARCC2-210ENST00000550519 CHADO15335 359 aa23.51■■□□□ 1.35
SMARCC2-210ENST00000550519 CYP11A1P05108 521 aa23.51■■□□□ 1.35
SMARCC2-210ENST00000550519 CCNE1P24864 410 aa23.51■■□□□ 1.35
SMARCC2-210ENST00000550519 NMT1P30419 496 aaKnown RBP23.51■■□□□ 1.35
SMARCC2-210ENST00000550519 TMEM132DQ14C87 1099 aa23.51■■□□□ 1.35
SMARCC2-210ENST00000550519 STXBP5Q5T5C0 1151 aa23.51■■□□□ 1.35
SMARCC2-210ENST00000550519 LARP1BQ659C4 914 aaKnown RBP23.51■■□□□ 1.35
SMARCC2-210ENST00000550519 ARMCX5Q6P1M9 558 aa23.51■■□□□ 1.35
SMARCC2-210ENST00000550519 ARID3BQ8IVW6 561 aaPredicted RBP23.51■■□□□ 1.35
SMARCC2-210ENST00000550519 GPR161Q8N6U8 529 aaKnown RBP23.51■■□□□ 1.35
SMARCC2-210ENST00000550519 MSANTD3Q96H12 275 aa23.51■■□□□ 1.35
SMARCC2-210ENST00000550519 ST6GALNAC4Q9H4F1 302 aa23.51■■□□□ 1.35
SMARCC2-210ENST00000550519 ZHX3Q9H4I2 956 aa23.51■■□□□ 1.35
SMARCC2-210ENST00000550519 ASB7Q9H672 318 aa23.51■■□□□ 1.35
SMARCC2-210ENST00000550519 MED19A0JLT2 244 aaPredicted RBP23.5■■□□□ 1.35
SMARCC2-210ENST00000550519 ANKRD63C9JTQ0 380 aa23.5■■□□□ 1.35
SMARCC2-210ENST00000550519 KRT18P05783 430 aaKnown RBP23.5■■□□□ 1.35
SMARCC2-210ENST00000550519 MCM2P49736 904 aa23.5■■□□□ 1.35
SMARCC2-210ENST00000550519 NRLP54845 237 aa23.5■■□□□ 1.35
SMARCC2-210ENST00000550519 YAF2Q8IY57 180 aa23.5■■□□□ 1.35
SMARCC2-210ENST00000550519 OR10T2Q8NGX3 314 aa23.5■■□□□ 1.35
SMARCC2-210ENST00000550519 LARP4BQ92615 738 aaKnown RBP23.5■■□□□ 1.35
SMARCC2-210ENST00000550519 STYXL1Q9Y6J8 313 aa23.5■■□□□ 1.35
SMARCC2-210ENST00000550519 TBCAO75347 108 aaKnown RBP23.49■■□□□ 1.35
SMARCC2-210ENST00000550519 SOAT2O75908 522 aa23.49■■□□□ 1.35
SMARCC2-210ENST00000550519 FGF19O95750 216 aa23.49■■□□□ 1.35
SMARCC2-210ENST00000550519 ACOT2P49753 483 aa23.49■■□□□ 1.35
SMARCC2-210ENST00000550519 CCR3P51677 355 aa23.49■■□□□ 1.35
SMARCC2-210ENST00000550519 GAS6Q14393 721 aa23.49■■□□□ 1.35
SMARCC2-210ENST00000550519 PPP2R5DQ14738 602 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms