RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	CDK17	Q00537	523 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	ARID5A	Q03989	594 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	GOLGA8F	Q08AF8	430 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	GOLGA8DP	Q0D2H9	430 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	KLHL30	Q0D2K2	578 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	BTG3	Q14201	252 aa	Predicted RBP	12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	SPOUT1	Q5T280	376 aa	Known RBP	12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	C16orf59	Q7L2K0	433 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	ZNF280B	Q86YH2	543 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	TMTC1	Q8IUR5	882 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	COLGALT2	Q8IYK4	626 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	TOP6BL	Q8N6T0	577 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	APPL2	Q8NEU8	664 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	PHOSPHO2	Q8TCD6	241 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	KAT5	Q92993	513 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	ELMO3	Q96BJ8	720 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	MS4A3	Q96HJ5	214 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	ARID3A	Q99856	593 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	DEF6	Q9H4E7	631 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	CISH	Q9NSE2	258 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	AJAP1	Q9UKB5	411 aa	Predicted RBP	12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	DSE	Q9UL01	958 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	POLI	Q9UNA4	740 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	FAN1	Q9Y2M0	1017 aa		12.43	□□□□□ -0.42
CNOT2-223	ENST00000550160	TRIP11	Q15643	1979 aa		12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	FOXN3	O00409	490 aa	Predicted RBP	12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	CYB561D2	O14569	222 aa		12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	DDHD2	O94830	711 aa		12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	IPO7	O95373	1038 aa	Known RBP	12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	ODC1	P11926	461 aa		12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	LAG3	P18627	525 aa		12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	CD58	P19256	250 aa		12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	PTK2	Q05397	1052 aa		12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	ELAVL2	Q12926	359 aa	Known RBP	12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	MEA1	Q16626	185 aa		12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	FAM117B	Q6P1L5	589 aa		12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	TMEM270	Q6UE05	265 aa		12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	METTL23	Q86XA0	190 aa		12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	FAM71A	Q8IYT1	594 aa		12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	TMEM86A	Q8N2M4	240 aa		12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	RBBP8NL	Q8NC74	664 aa	Predicted RBP	12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	SPATA18	Q8TC71	538 aa		12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	SNX25	Q9H3E2	840 aa		12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	SMYD3	Q9H7B4	428 aa		12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	NRDE2	Q9H7Z3	1164 aa		12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	INSL6	Q9Y581	213 aa		12.42	□□□□□ -0.42
CNOT2-223	ENST00000550160	TDRD15	B5MCY1	1934 aa	Known RBP	12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	SSU72P8	A0A1W2PR75	194 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	NRP1	O14786	923 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	SPTLC1	O15269	473 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	ARHGAP6	O43182	974 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	TACC1	O75410	805 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	TADA2A	O75478	443 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	KIF4A	O95239	1232 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	GJB5	O95377	273 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	WEE2	P0C1S8	567 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	SKIL	P12757	684 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	ATP2A2	P16615	1042 aa	Known RBP	12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	FECH	P22830	423 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	ANXA13	P27216	316 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	CYLC1	P35663	651 aa	Predicted RBP	12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	PRKCI	P41743	596 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	AARS	P49588	968 aa	Known RBP eCLIP	12.41	□□□□□ -0.42	4e-6	■□□□□ 9.4
CNOT2-223	ENST00000550160	EPHB4	P54760	987 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	SCARA3	Q6AZY7	606 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	UNC93A	Q86WB7	457 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	CCDC170	Q8IYT3	715 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	ADGRF2	Q8IZF7	708 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	TMEM130	Q8N3G9	435 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	ZNF689	Q96CS4	500 aa	Predicted RBP	12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	SENP8	Q96LD8	212 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	CCDC42	Q96M95	316 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	ZNF558	Q96NG5	402 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	PAAF1	Q9BRP4	392 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	NT5C1A	Q9BXI3	368 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	GPR88	Q9GZN0	384 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	AAAS	Q9NRG9	546 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	CACNG4	Q9UBN1	327 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	DNAJB4	Q9UDY4	337 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	BARX2	Q9UMQ3	279 aa	Predicted RBP	12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	CNTN6	Q9UQ52	1028 aa		12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	PRG3	Q9Y2Y8	225 aa	Predicted RBP	12.41	□□□□□ -0.42
CNOT2-223	ENST00000550160	SF3B1	O75533	1304 aa	Known RBP eCLIP	12.4	□□□□□ -0.42	2e-6	■■■■■ 75.1
CNOT2-223	ENST00000550160		A8MXQ7	604 aa		12.4	□□□□□ -0.42
CNOT2-223	ENST00000550160	CYP26A1	O43174	497 aa		12.4	□□□□□ -0.42
CNOT2-223	ENST00000550160	CILP	O75339	1184 aa		12.4	□□□□□ -0.42
CNOT2-223	ENST00000550160	GALT	P07902	379 aa		12.4	□□□□□ -0.42
CNOT2-223	ENST00000550160	PAEP	P09466	180 aa		12.4	□□□□□ -0.42
CNOT2-223	ENST00000550160	PNMA6A	P0CW24	399 aa	Predicted RBP	12.4	□□□□□ -0.42
CNOT2-223	ENST00000550160	ACO1	P21399	889 aa	Known RBP	12.4	□□□□□ -0.42
CNOT2-223	ENST00000550160	WARS	P23381	471 aa	Known RBP	12.4	□□□□□ -0.42
CNOT2-223	ENST00000550160	MAGEA10	P43363	369 aa	Predicted RBP	12.4	□□□□□ -0.42
CNOT2-223	ENST00000550160	RAP1GAP	P47736	663 aa		12.4	□□□□□ -0.42
CNOT2-223	ENST00000550160	LHX1	P48742	406 aa		12.4	□□□□□ -0.42
CNOT2-223	ENST00000550160	SLC11A1	P49279	550 aa		12.4	□□□□□ -0.42
CNOT2-223	ENST00000550160	BCAR1	P56945	870 aa		12.4	□□□□□ -0.42
CNOT2-223	ENST00000550160	INCA1	Q0VD86	236 aa		12.4	□□□□□ -0.42
CNOT2-223	ENST00000550160	SOWAHA	Q2M3V2	549 aa		12.4	□□□□□ -0.42
CNOT2-223	ENST00000550160	IRF2BP2	Q7Z5L9	587 aa		12.4	□□□□□ -0.42
CNOT2-223	ENST00000550160	HERC6	Q8IVU3	1022 aa		12.4	□□□□□ -0.42

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