RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 FBXO47Q5MNV8 452 aa10.54□□□□□ -0.72
PRIM1-204ENST00000549549 RETSATQ6NUM9 610 aa10.54□□□□□ -0.72
PRIM1-204ENST00000549549 CMTM4Q8IZR5 234 aa10.54□□□□□ -0.72
PRIM1-204ENST00000549549 SLC15A4Q8N697 577 aa10.54□□□□□ -0.72
PRIM1-204ENST00000549549 STYXQ8WUJ0 223 aa10.54□□□□□ -0.72
PRIM1-204ENST00000549549 SNX27Q96L92 541 aa10.54□□□□□ -0.72
PRIM1-204ENST00000549549 YTHDC1Q96MU7 727 aaKnown RBP10.54□□□□□ -0.72
PRIM1-204ENST00000549549 STK31Q9BXU1 1019 aa10.54□□□□□ -0.72
PRIM1-204ENST00000549549 MCOLN1Q9GZU1 580 aa10.54□□□□□ -0.72
PRIM1-204ENST00000549549 CAPN11Q9UMQ6 739 aa10.54□□□□□ -0.72
PRIM1-204ENST00000549549 TCRBV7S2A1N4TA0A589 114 aa10.53□□□□□ -0.72
PRIM1-204ENST00000549549 CXorf49A8MYA2 514 aaPredicted RBP10.53□□□□□ -0.72
PRIM1-204ENST00000549549 LDHCP07864 332 aa10.53□□□□□ -0.72
PRIM1-204ENST00000549549 BTF3P20290 206 aaKnown RBP10.53□□□□□ -0.72
PRIM1-204ENST00000549549 RXRGP48443 463 aa10.53□□□□□ -0.72
PRIM1-204ENST00000549549 GZMKP49863 264 aa10.53□□□□□ -0.72
PRIM1-204ENST00000549549 EPHB3P54753 998 aa10.53□□□□□ -0.72
PRIM1-204ENST00000549549 ARL6IP4Q66PJ3 421 aaKnown RBP10.53□□□□□ -0.72
PRIM1-204ENST00000549549 LIN54Q6MZP7 749 aa10.53□□□□□ -0.72
PRIM1-204ENST00000549549 PCSK9Q8NBP7 692 aaKnown RBP10.53□□□□□ -0.72
PRIM1-204ENST00000549549 OR5M3Q8NGP4 307 aa10.53□□□□□ -0.72
PRIM1-204ENST00000549549 SLC30A5Q8TAD4 765 aa10.53□□□□□ -0.72
PRIM1-204ENST00000549549 SPPL3Q8TCT6 385 aa10.53□□□□□ -0.72
PRIM1-204ENST00000549549 OTUD7AQ8TE49 926 aaPredicted RBP10.53□□□□□ -0.72
PRIM1-204ENST00000549549 CFHR4Q92496 578 aa10.53□□□□□ -0.72
PRIM1-204ENST00000549549 FAM167BQ9BTA0 163 aa10.53□□□□□ -0.72
PRIM1-204ENST00000549549 L2HGDHQ9H9P8 463 aa10.53□□□□□ -0.72
PRIM1-204ENST00000549549 TBC1D23Q9NUY8 699 aa10.53□□□□□ -0.72
PRIM1-204ENST00000549549 RPS6KL1Q9Y6S9 549 aa10.53□□□□□ -0.72
PRIM1-204ENST00000549549 PJA2O43164 708 aa10.52□□□□□ -0.73
PRIM1-204ENST00000549549 SASH1O94885 1247 aa10.52□□□□□ -0.73
PRIM1-204ENST00000549549 PLA2G1BP04054 148 aaKnown RBP10.52□□□□□ -0.73
PRIM1-204ENST00000549549 CSF2RBP32927 897 aa10.52□□□□□ -0.73
PRIM1-204ENST00000549549 LIMS1P48059 325 aa10.52□□□□□ -0.73
PRIM1-204ENST00000549549 EIF5P55010 431 aaKnown RBP10.52□□□□□ -0.73
PRIM1-204ENST00000549549 UCP3P55916 312 aa10.52□□□□□ -0.73
PRIM1-204ENST00000549549 DUSP8Q13202 625 aa10.52□□□□□ -0.73
PRIM1-204ENST00000549549 G3BP1Q13283 466 aaKnown RBP eCLIP10.52□□□□□ -0.73
PRIM1-204ENST00000549549 MRPL49Q13405 166 aaKnown RBP10.52□□□□□ -0.73
PRIM1-204ENST00000549549 USP17L6PQ6QN14 398 aa10.52□□□□□ -0.73
PRIM1-204ENST00000549549 USP30Q70CQ3 517 aa10.52□□□□□ -0.73
PRIM1-204ENST00000549549 MOGAT3Q86VF5 341 aa10.52□□□□□ -0.73
PRIM1-204ENST00000549549 YAF2Q8IY57 180 aa10.52□□□□□ -0.73
PRIM1-204ENST00000549549 ANKRD53Q8N9V6 530 aa10.52□□□□□ -0.73
PRIM1-204ENST00000549549 CCDC150Q8NCX0 1101 aa10.52□□□□□ -0.73
PRIM1-204ENST00000549549 SPSB4Q96A44 273 aa10.52□□□□□ -0.73
PRIM1-204ENST00000549549 KATNAL1Q9BW62 490 aa10.52□□□□□ -0.73
PRIM1-204ENST00000549549 UNC45AQ9H3U1 944 aa10.52□□□□□ -0.73
PRIM1-204ENST00000549549 USP40Q9NVE5 1235 aa10.52□□□□□ -0.73
PRIM1-204ENST00000549549 MID2Q9UJV3 735 aa10.52□□□□□ -0.73
PRIM1-204ENST00000549549 ZNF503-AS2A6NEH8 195 aa10.51□□□□□ -0.73
PRIM1-204ENST00000549549 KIAA0391O15091 583 aaKnown RBP10.51□□□□□ -0.73
PRIM1-204ENST00000549549 GRPP07492 148 aa10.51□□□□□ -0.73
PRIM1-204ENST00000549549 CKMT1AP12532 417 aa10.51□□□□□ -0.73
PRIM1-204ENST00000549549 MPP1Q00013 466 aa10.51□□□□□ -0.73
PRIM1-204ENST00000549549 EFR3AQ14156 821 aa10.51□□□□□ -0.73
PRIM1-204ENST00000549549 USP10Q14694 798 aaKnown RBP10.51□□□□□ -0.73
PRIM1-204ENST00000549549 KRT40Q6A162 431 aa10.51□□□□□ -0.73
PRIM1-204ENST00000549549 KIAA0408Q6ZU52 694 aa10.51□□□□□ -0.73
PRIM1-204ENST00000549549 RSRC2Q7L4I2 434 aaKnown RBP10.51□□□□□ -0.73
PRIM1-204ENST00000549549 USP37Q86T82 979 aa10.51□□□□□ -0.73
PRIM1-204ENST00000549549 MPP5Q8N3R9 675 aa10.51□□□□□ -0.73
PRIM1-204ENST00000549549 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.51□□□□□ -0.731e-6■□□□□ 10.2
PRIM1-204ENST00000549549 GGA3Q9NZ52 723 aa10.51□□□□□ -0.73
PRIM1-204ENST00000549549 SLC45A2Q9UMX9 530 aa10.51□□□□□ -0.73
PRIM1-204ENST00000549549 SCAF8Q9UPN6 1271 aaKnown RBP10.51□□□□□ -0.73
PRIM1-204ENST00000549549 TMEM98Q9Y2Y6 226 aa10.51□□□□□ -0.73
PRIM1-204ENST00000549549 TMX2Q9Y320 296 aa10.51□□□□□ -0.73
PRIM1-204ENST00000549549 PIP5K1BO14986 540 aa10.5□□□□□ -0.73
PRIM1-204ENST00000549549 FAM155BO75949 473 aa10.5□□□□□ -0.73
PRIM1-204ENST00000549549 TNFRSF6BO95407 300 aa10.5□□□□□ -0.73
PRIM1-204ENST00000549549 HSP90AA1P07900 732 aaKnown RBP10.5□□□□□ -0.73
PRIM1-204ENST00000549549 SNRPA1P09661 255 aaKnown RBP10.5□□□□□ -0.73
PRIM1-204ENST00000549549 ZNF888P0CJ79 500 aaPredicted RBP10.5□□□□□ -0.73
PRIM1-204ENST00000549549 POLE2P56282 527 aa10.5□□□□□ -0.73
PRIM1-204ENST00000549549 TCF15Q12870 199 aa10.5□□□□□ -0.73
PRIM1-204ENST00000549549 ACAP1Q15027 740 aa10.5□□□□□ -0.73
PRIM1-204ENST00000549549 C1orf122Q6ZSJ8 110 aa10.5□□□□□ -0.73
PRIM1-204ENST00000549549 KRT73Q86Y46 540 aa10.5□□□□□ -0.73
PRIM1-204ENST00000549549 AOPEPQ8N6M6 819 aa10.5□□□□□ -0.73
PRIM1-204ENST00000549549 SLC35B2Q8TB61 432 aa10.5□□□□□ -0.73
PRIM1-204ENST00000549549 SCAMP4Q969E2 229 aa10.5□□□□□ -0.73
PRIM1-204ENST00000549549 GPHA2Q96T91 129 aa10.5□□□□□ -0.73
PRIM1-204ENST00000549549 CNPPD1Q9BV87 410 aa10.5□□□□□ -0.73
PRIM1-204ENST00000549549 GCM1Q9NP62 436 aa10.5□□□□□ -0.73
PRIM1-204ENST00000549549 RASSF1Q9NS23 344 aa10.5□□□□□ -0.73
PRIM1-204ENST00000549549 SRP68Q9UHB9 627 aaKnown RBP10.5□□□□□ -0.73
PRIM1-204ENST00000549549 ADAM29Q9UKF5 820 aa10.5□□□□□ -0.73
PRIM1-204ENST00000549549 LAS1LQ9Y4W2 734 aaKnown RBP10.5□□□□□ -0.73
PRIM1-204ENST00000549549 PMF1-BGLAPU3KQ54 211 aa10.5□□□□□ -0.73
PRIM1-204ENST00000549549 PNPLA7Q6ZV29 1317 aa10.5□□□□□ -0.73
PRIM1-204ENST00000549549 BIN1O00499 593 aa10.49□□□□□ -0.73
PRIM1-204ENST00000549549 SEMA7AO75326 666 aa10.49□□□□□ -0.73
PRIM1-204ENST00000549549 AMHP03971 560 aa10.49□□□□□ -0.73
PRIM1-204ENST00000549549 PSMC1P62191 440 aaKnown RBP10.49□□□□□ -0.73
PRIM1-204ENST00000549549 MAPKAPK3Q16644 382 aa10.49□□□□□ -0.73
PRIM1-204ENST00000549549 TBR1Q16650 682 aa10.49□□□□□ -0.73
PRIM1-204ENST00000549549 ZMAT1Q5H9K5 638 aa10.49□□□□□ -0.73
PRIM1-204ENST00000549549 CRB2Q5IJ48 1285 aa10.49□□□□□ -0.73
PRIM1-204ENST00000549549 ZNF529Q6P280 563 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms