RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 CEP72Q9P209 647 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 PRG3Q9Y2Y8 225 aaPredicted RBP10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 A0A1W2PQJ5 194 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 LINC01553A4QN01 128 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 CYB561D2O14569 222 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 CST3P01034 146 aaPredicted RBP10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 SOD2P04179 222 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 URODP06132 367 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 AFF1P51825 1210 aaKnown RBP10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 BPIFB4P59827 614 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 ERVK-21P61565 698 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 YWHAHQ04917 246 aaPredicted RBP10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 SMARCB1Q12824 385 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 CUL2Q13617 745 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 MAPRE1Q15691 268 aaKnown RBP10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 PPP2R2DQ66LE6 453 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 KIAA1841Q6NSI8 718 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 FUT10Q6P4F1 479 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 ELMSAN1Q6PJG2 1045 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 DDX53Q86TM3 631 aaKnown RBP10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 FBXO22Q8NEZ5 403 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 CXorf38Q8TB03 319 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 PPP2R3CQ969Q6 453 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 TNIP3Q96KP6 325 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 SENP8Q96LD8 212 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 SPAG5Q96R06 1193 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 MMS19Q96T76 1030 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 HERC2P3Q9BVR0 1158 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 BCO2Q9BYV7 579 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 SNX25Q9H3E2 840 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 NGRNQ9NPE2 291 aaKnown RBP10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 WDR70Q9NW82 654 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 IMPACTQ9P2X3 320 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 NXF1Q9UBU9 619 aaKnown RBP10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 DNAJB4Q9UDY4 337 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 SIK3Q9Y2K2 1263 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 SNX9Q9Y5X1 595 aa10.46□□□□□ -0.73
SMARCD1-206ENST00000549274 OR6C75A6NL08 312 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 NRDCO43847 1150 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 FGF18O76093 207 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 C1RP00736 705 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 CA3P07451 260 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 UCHL3P15374 230 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 WARSP23381 471 aaKnown RBP10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 DNAJB2P25686 324 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 ZNF75DP51815 510 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 GUCY2FP51841 1108 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 TSPY1Q01534 308 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 STILQ15468 1287 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 PTPROQ16827 1216 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 KLHDC7AQ5VTJ3 777 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 ZNF280DQ6N043 979 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 CNGA4Q8IV77 575 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 VSTM4Q8IW00 320 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 ADGRF2Q8IZF7 708 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 LMO3Q8TAP4 145 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 TIFAQ96CG3 184 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 NAP1L5Q96NT1 182 aaPredicted RBP10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 CRACR2AQ9BSW2 395 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 TTPALQ9BTX7 342 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 PBX4Q9BYU1 374 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 UBE2TQ9NPD8 197 aaPredicted RBP10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 KIAA1257Q9ULG3 409 aa10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 BARX2Q9UMQ3 279 aaPredicted RBP10.45□□□□□ -0.74
SMARCD1-206ENST00000549274 ATP8B3O60423 1300 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 TEX33O43247 280 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 SLC9A1P19634 815 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 FGFR3P22607 806 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 PBX1P40424 430 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 GLUD2P49448 558 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 RABGGTBP53611 331 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 TAP1Q03518 808 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 INCA1Q0VD86 236 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 TIGD5Q53EQ6 642 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 FAM171A1Q5VUB5 890 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 OVOS1Q6IE37 1185 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 GPR153Q6NV75 609 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 LIMS2Q7Z4I7 341 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 TMCO2Q7Z6W1 182 aaPredicted RBP10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 DRC7Q8IY82 874 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 PIK3R5Q8WYR1 880 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 SEMA4DQ92854 862 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 NT5C1AQ9BXI3 368 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 EMILIN2Q9BXX0 1053 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 STK33Q9BYT3 514 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 CXCL16Q9H2A7 254 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 MRPL17Q9NRX2 175 aaKnown RBP10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 FAM207AQ9NSI2 230 aaPredicted RBP10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 ZNHIT6Q9NWK9 470 aaKnown RBP10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 MARCH5Q9NX47 278 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 DPP7Q9UHL4 492 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 CDH9Q9ULB4 789 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 MAFFQ9ULX9 164 aa10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 LUC7L2Q9Y383 392 aaKnown RBP10.44□□□□□ -0.74
SMARCD1-206ENST00000549274 H3BNC9 293 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 OAZ2O95190 189 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 ADCY5O95622 1261 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 PAEPP09466 180 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 CTSAP10619 480 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms