RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 GAD2Q05329 585 aa14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 CCDC15Q0P6D6 951 aa14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 MOGSQ13724 837 aa14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 SETDB1Q15047 1291 aa14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 BRDTQ58F21 947 aaPredicted RBP14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 TXNRD3NBQ6F5E7 133 aa14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 MFSD7Q6UXD7 560 aa14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 USP37Q86T82 979 aa14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 ANKMY2Q8IV38 441 aa14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 TAB3Q8N5C8 712 aaPredicted RBP14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 EXD1Q8NHP7 514 aa14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 RMDN3Q96TC7 470 aa14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 FAM167BQ9BTA0 163 aa14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 C10orf88Q9H8K7 445 aa14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 ANKEF1Q9NU02 776 aa14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 TXLNGQ9NUQ3 528 aa14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 ZMYND8Q9ULU4 1186 aaPredicted RBP14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 STARD13Q9Y3M8 1113 aa14.96□□□□□ -0.02
RAPGEF3-218ENST00000548919 H0YIN7 160 aa14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 DNALI1O14645 258 aaPredicted RBP14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 VNN1O95497 513 aa14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 GM2AP17900 193 aa14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 PSEN1P49768 467 aa14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 DLGAP5Q15398 846 aa14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 ZBTB41Q5SVQ8 909 aa14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 EP400NLQ6ZTU2 488 aa14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 FNBP1Q96RU3 617 aa14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 C12orf65Q9H3J6 166 aaKnown RBP14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 SLC24A3Q9HC58 644 aa14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 COL2A1P02458 1487 aaPredicted RBP14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 ABHD2P08910 425 aa14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 SKIV2L2P42285 1042 aaKnown RBP14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 JAK3P52333 1124 aa14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 SPARCL1Q14515 664 aa14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 EFTUD2Q15029 972 aaKnown RBP eCLIP14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 MCF2L2Q86YR7 1114 aa14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 SMC6Q96SB8 1091 aa14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 IVNS1ABPQ9Y6Y0 642 aa14.95□□□□□ -0.02
RAPGEF3-218ENST00000548919 WDR91A4D1P6 747 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 IFNB1P01574 187 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 T-ENOLP0DO92 83 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 YARSP54577 528 aaKnown RBP14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 ZACNQ401N2 412 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 ZNF677Q86XU0 584 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 ABRAQ8N0Z2 381 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 ZBTB45Q96K62 511 aaPredicted RBP14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 SLITRK1Q96PX8 696 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 RAB3IPQ96QF0 476 aaPredicted RBP14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 NTPCRQ9BSD7 190 aaKnown RBP14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 TMEM121Q9BTD3 319 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 MAK16Q9BXY0 300 aaKnown RBP14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 TRIM6Q9C030 488 aaPredicted RBP14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 LRMDAQ9H2I8 198 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 SAE1Q9UBE0 346 aaPredicted RBP14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 USH1CQ9Y6N9 552 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 F8VP50 259 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 MAGEB2O15479 319 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 ONECUT3O60422 494 aaPredicted RBP14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 ZC3H11AO75152 810 aaKnown RBP eCLIP14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 KRT1P04264 644 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 EPHB2P29323 1055 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 SEZ6Q53EL9 994 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 PLEKHA7Q6IQ23 1121 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 LRRC8CQ8TDW0 803 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 PDCD2LQ9BRP1 358 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 MRPL47Q9HD33 250 aaKnown RBP14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 XPNPEP1Q9NQW7 623 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 NUMBLQ9Y6R0 609 aa14.94□□□□□ -0.02
RAPGEF3-218ENST00000548919 ZNF541Q9H0D2 1346 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 PRPF4O43172 522 aaKnown RBP eCLIP14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 EDF1O60869 148 aaKnown RBP14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 UPP2O95045 317 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 C4BPAP04003 597 aaKnown RBP14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 LIG4P49917 911 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 BPIFB4P59827 614 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 KRT76Q01546 638 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 PLCB3Q01970 1234 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 ZNF252P-AS1Q0IIN9 211 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 CUL2Q13617 745 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 PDK4Q16654 411 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 TRIM68Q6AZZ1 485 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 SWSAP1Q6NVH7 229 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 NLRX1Q86UT6 975 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 LONP2Q86WA8 852 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 RIBC1Q8N443 379 aaPredicted RBP14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 FEZF2Q8TBJ5 459 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 SPIRE2Q8WWL2 714 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 MOV10L1Q9BXT6 1211 aaKnown RBP14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 HAPLN2Q9GZV7 340 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 PXMP2Q9NR77 195 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 SEPT9Q9UHD8 586 aaPredicted RBP14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 DOCK5Q9H7D0 1870 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 H0Y3Z8 333 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 ABL2P42684 1182 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 PDIA2Q13087 525 aaKnown RBP14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 WDR72Q3MJ13 1102 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 ARHGEF16Q5VV41 709 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 LVRNQ6Q4G3 990 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 SAMD3Q8N6K7 520 aa14.93□□□□□ -0.02
RAPGEF3-218ENST00000548919 ALLCQ8N6M5 410 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms