RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	BLOC1S1	P78537	153 aa		5.68	□□□□□ -1.5
LGR5-204	ENST00000547310	REST	Q13127	1097 aa		5.68	□□□□□ -1.5
LGR5-204	ENST00000547310	FOXR2	Q6PJQ5	311 aa		5.68	□□□□□ -1.5
LGR5-204	ENST00000547310	TMPRSS9	Q7Z410	1059 aa		5.68	□□□□□ -1.5
LGR5-204	ENST00000547310	PPP1R3B	Q86XI6	285 aa		5.68	□□□□□ -1.5
LGR5-204	ENST00000547310	CAMKK1	Q8N5S9	505 aa		5.68	□□□□□ -1.5
LGR5-204	ENST00000547310	TMIE	Q8NEW7	156 aa		5.68	□□□□□ -1.5
LGR5-204	ENST00000547310	PLBD2	Q8NHP8	589 aa		5.68	□□□□□ -1.5
LGR5-204	ENST00000547310	PROKR1	Q8TCW9	393 aa		5.68	□□□□□ -1.5
LGR5-204	ENST00000547310	DDX17	Q92841	729 aa	Known RBP	5.68	□□□□□ -1.5
LGR5-204	ENST00000547310	SLC35A4	Q96G79	324 aa		5.68	□□□□□ -1.5
LGR5-204	ENST00000547310	LRGUK	Q96M69	825 aa		5.68	□□□□□ -1.5
LGR5-204	ENST00000547310	ZSWIM1	Q9BR11	485 aa		5.68	□□□□□ -1.5
LGR5-204	ENST00000547310	MLST8	Q9BVC4	326 aa		5.68	□□□□□ -1.5
LGR5-204	ENST00000547310	GALNT9	Q9HCQ5	603 aa		5.68	□□□□□ -1.5
LGR5-204	ENST00000547310	NOB1	Q9ULX3	412 aa	Known RBP	5.68	□□□□□ -1.5
LGR5-204	ENST00000547310	SLC45A2	Q9UMX9	530 aa		5.68	□□□□□ -1.5
LGR5-204	ENST00000547310	COL4A3	Q01955	1670 aa		5.68	□□□□□ -1.5
LGR5-204	ENST00000547310		A0A1W2PS29	197 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	PIPSL	A2A3N6	862 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310		E7ENX8	843 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	CTNND1	O60716	968 aa	Known RBP	5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	ERN1	O75460	977 aa	Known RBP	5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	FOS	P01100	380 aa	Predicted RBP	5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	HTR1B	P28222	390 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	HSD11B2	P80365	405 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	GUCY1B3	Q02153	619 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	TAP2	Q03519	686 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	COL10A1	Q03692	680 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	PIGF	Q07326	219 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	SCAP	Q12770	1279 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	CYP2A13	Q16696	494 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	ANO6	Q4KMQ2	910 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	SP5	Q6BEB4	398 aa	Predicted RBP	5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	KCNV1	Q6PIU1	500 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	OVCH2	Q7RTZ1	564 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	CFAP52	Q8N1V2	620 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	BRIX1	Q8TDN6	353 aa	Known RBP	5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	NACC2	Q96BF6	587 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	C1orf43	Q9BWL3	253 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	TLR10	Q9BXR5	811 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	SIK2	Q9H0K1	926 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	SERHL2	Q9H4I8	314 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	CTTNBP2NL	Q9P2B4	639 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	USP25	Q9UHP3	1055 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	NOX1	Q9Y5S8	564 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310	AATK	Q6ZMQ8	1374 aa		5.67	□□□□□ -1.5
LGR5-204	ENST00000547310		E9PLN8	166 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310		H3BUI4	141 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	SPDEF	O95238	335 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	HRG	P04196	525 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	HMGB1	P09429	215 aa	Known RBP	5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	EGR2	P11161	476 aa	Predicted RBP	5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	KCNA2	P16389	499 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	RAB1A	P62820	205 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	GPSM2	P81274	684 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	ZNF844	Q08AG5	666 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	FGL2	Q14314	439 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	HABP2	Q14520	560 aa	Predicted RBP	5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	PTPA	Q15257	358 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	GFOD2	Q3B7J2	385 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	CCDC157	Q569K6	752 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	ABHD17B	Q5VST6	288 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310		Q6ZPA2	131 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	CHST15	Q7LFX5	561 aa	Predicted RBP	5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	DAAM2	Q86T65	1068 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	KIAA0319L	Q8IZA0	1049 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	ZBTB34	Q8NCN2	500 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	PDPR	Q8NCN5	879 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	TSR2	Q969E8	191 aa	Known RBP	5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	VKORC1	Q9BQB6	163 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	ALOXE3	Q9BYJ1	711 aa		5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	VSX1	Q9NZR4	365 aa	Predicted RBP	5.66	□□□□□ -1.5
LGR5-204	ENST00000547310	CCDC195	A0A1B0GUA6	201 aa		5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	FAM227A	F5H4B4	570 aa		5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	LPXN	O60711	386 aa		5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	RAMP2	O60895	175 aa		5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	PARN	O95453	639 aa	Known RBP	5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	ZEB1	P37275	1124 aa	Predicted RBP	5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	VAV2	P52735	878 aa		5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	MRPS21	P82921	87 aa	Known RBP	5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	GBX1	Q14549	363 aa		5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	PPP1R32	Q7Z5V6	425 aa		5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	FMNL3	Q8IVF7	1028 aa		5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	SLC17A8	Q8NDX2	589 aa		5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	TTC8	Q8TAM2	541 aa		5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	PPP1R35	Q8TAP8	253 aa		5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	POC1B	Q8TC44	478 aa		5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	TNPO1	Q92973	898 aa	Known RBP	5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	COQ10A	Q96MF6	247 aa		5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	IMPG2	Q9BZV3	1241 aa		5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	RSAD1	Q9HA92	442 aa		5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	SARS2	Q9NP81	518 aa	Known RBP	5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	L1RE1	Q9UN81	338 aa		5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	MAP3K2	Q9Y2U5	619 aa		5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	PCDHA1	Q9Y5I3	950 aa		5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	5.65	□□□□□ -1.5
LGR5-204	ENST00000547310	PRAMEF33	A0A0G2JMD5	474 aa		5.64	□□□□□ -1.51
LGR5-204	ENST00000547310	TMEM191C	A6NGB0	347 aa		5.64	□□□□□ -1.51
LGR5-204	ENST00000547310	INO80B-WBP1	J3KQ70	363 aa		5.64	□□□□□ -1.51

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