RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 CYP11A1P05108 521 aa24.59■■□□□ 1.53
CHD4-214ENST00000545942 DCNP07585 359 aaKnown RBP24.59■■□□□ 1.53
CHD4-214ENST00000545942 PRKCQQ04759 706 aa24.59■■□□□ 1.53
CHD4-214ENST00000545942 DUSP4Q13115 394 aa24.59■■□□□ 1.53
CHD4-214ENST00000545942 MLF2Q15773 248 aaPredicted RBP24.59■■□□□ 1.53
CHD4-214ENST00000545942 TANGO2Q6ICL3 276 aa24.59■■□□□ 1.53
CHD4-214ENST00000545942 EFCAB13Q8IY85 973 aa24.59■■□□□ 1.53
CHD4-214ENST00000545942 SYCP3Q8IZU3 236 aa24.59■■□□□ 1.53
CHD4-214ENST00000545942 PJA1Q8NG27 643 aa24.59■■□□□ 1.53
CHD4-214ENST00000545942 FAM213AQ9BRX8 229 aa24.59■■□□□ 1.53
CHD4-214ENST00000545942 TFIP11Q9UBB9 837 aaKnown RBP24.59■■□□□ 1.53
CHD4-214ENST00000545942 LDHAP00338 332 aaKnown RBP24.58■■□□□ 1.52
CHD4-214ENST00000545942 MYL4P12829 197 aa24.58■■□□□ 1.52
CHD4-214ENST00000545942 GARTP22102 1010 aa24.58■■□□□ 1.52
CHD4-214ENST00000545942 ALDH1A3P47895 512 aa24.58■■□□□ 1.52
CHD4-214ENST00000545942 TAF6P49848 677 aa24.58■■□□□ 1.52
CHD4-214ENST00000545942 EPHB3P54753 998 aa24.58■■□□□ 1.52
CHD4-214ENST00000545942 FAM78AQ5JUQ0 283 aa24.58■■□□□ 1.52
CHD4-214ENST00000545942 CENPPQ6IPU0 288 aa24.58■■□□□ 1.52
CHD4-214ENST00000545942 CCDC65Q8IXS2 484 aa24.58■■□□□ 1.52
CHD4-214ENST00000545942 ASB16Q96NS5 453 aa24.58■■□□□ 1.52
CHD4-214ENST00000545942 PLA2G2FQ9BZM2 168 aa24.58■■□□□ 1.52
CHD4-214ENST00000545942 FOXQ1Q9C009 403 aa24.58■■□□□ 1.52
CHD4-214ENST00000545942 LRRC27Q9C0I9 530 aa24.58■■□□□ 1.52
CHD4-214ENST00000545942 CRISPLD1Q9H336 500 aa24.58■■□□□ 1.52
CHD4-214ENST00000545942 ZFP14Q9HCL3 533 aa24.58■■□□□ 1.52
CHD4-214ENST00000545942 DLGAP2Q9P1A6 1054 aa24.58■■□□□ 1.52
CHD4-214ENST00000545942 MYH15Q9Y2K3 1946 aa24.57■■□□□ 1.52
CHD4-214ENST00000545942 USP34Q70CQ2 3546 aa24.57■■□□□ 1.52
CHD4-214ENST00000545942 KANSL1LA0AUZ9 987 aa24.57■■□□□ 1.52
CHD4-214ENST00000545942 MTMR11A4FU01 709 aa24.57■■□□□ 1.52
CHD4-214ENST00000545942 CYB561D2O14569 222 aa24.57■■□□□ 1.52
CHD4-214ENST00000545942 MOSPD3O75425 235 aa24.57■■□□□ 1.52
CHD4-214ENST00000545942 YEATS4O95619 227 aa24.57■■□□□ 1.52
CHD4-214ENST00000545942 PDIA4P13667 645 aaKnown RBP24.57■■□□□ 1.52
CHD4-214ENST00000545942 FCARP24071 287 aa24.57■■□□□ 1.52
CHD4-214ENST00000545942 METTL23Q86XA0 190 aa24.57■■□□□ 1.52
CHD4-214ENST00000545942 HSCBQ8IWL3 235 aa24.57■■□□□ 1.52
CHD4-214ENST00000545942 ATAD1Q8NBU5 361 aa24.57■■□□□ 1.52
CHD4-214ENST00000545942 SAAL1Q96ER3 474 aa24.57■■□□□ 1.52
CHD4-214ENST00000545942 TMEM209Q96SK2 561 aa24.57■■□□□ 1.52
CHD4-214ENST00000545942 PYM1Q9BRP8 204 aaKnown RBP24.57■■□□□ 1.52
CHD4-214ENST00000545942 DDX23Q9BUQ8 820 aaKnown RBP24.57■■□□□ 1.52
CHD4-214ENST00000545942 TNMDQ9H2S6 317 aa24.57■■□□□ 1.52
CHD4-214ENST00000545942 CUEDC2Q9H467 287 aa24.57■■□□□ 1.52
CHD4-214ENST00000545942 TMEM206Q9H813 350 aa24.57■■□□□ 1.52
CHD4-214ENST00000545942 SLC27A5Q9Y2P5 690 aa24.57■■□□□ 1.52
CHD4-214ENST00000545942 NRG2O14511 850 aaPredicted RBP24.56■■□□□ 1.52
CHD4-214ENST00000545942 SV2CQ496J9 727 aa24.56■■□□□ 1.52
CHD4-214ENST00000545942 FRMD5Q7Z6J6 570 aa24.56■■□□□ 1.52
CHD4-214ENST00000545942 BRSK2Q8IWQ3 736 aa24.56■■□□□ 1.52
CHD4-214ENST00000545942 OR10T2Q8NGX3 314 aa24.56■■□□□ 1.52
CHD4-214ENST00000545942 SMARCD2Q92925 531 aa24.56■■□□□ 1.52
CHD4-214ENST00000545942 ZSWIM3Q96MP5 696 aa24.56■■□□□ 1.52
CHD4-214ENST00000545942 FGFBP2Q9BYJ0 223 aa24.56■■□□□ 1.52
CHD4-214ENST00000545942 DNAJC25Q9H1X3 360 aa24.56■■□□□ 1.52
CHD4-214ENST00000545942 HSFX1Q9UBD0 423 aa24.56■■□□□ 1.52
CHD4-214ENST00000545942 MYO15AQ9UKN7 3530 aa24.55■■□□□ 1.52
CHD4-214ENST00000545942 HSP90AA1P07900 732 aaKnown RBP24.55■■□□□ 1.52
CHD4-214ENST00000545942 GJA1P17302 382 aa24.55■■□□□ 1.52
CHD4-214ENST00000545942 E2F4Q16254 413 aa24.55■■□□□ 1.52
CHD4-214ENST00000545942 STXBP4Q6ZWJ1 553 aa24.55■■□□□ 1.52
CHD4-214ENST00000545942 THEM5Q8N1Q8 247 aa24.55■■□□□ 1.52
CHD4-214ENST00000545942 ZSWIM2Q8NEG5 633 aa24.55■■□□□ 1.52
CHD4-214ENST00000545942 ZNF560Q96MR9 790 aa24.55■■□□□ 1.52
CHD4-214ENST00000545942 GPR88Q9GZN0 384 aa24.55■■□□□ 1.52
CHD4-214ENST00000545942 KBTBD4Q9NVX7 518 aa24.55■■□□□ 1.52
CHD4-214ENST00000545942 RBAKQ9NYW8 714 aaPredicted RBP24.55■■□□□ 1.52
CHD4-214ENST00000545942 ASB3Q9Y575 518 aa24.55■■□□□ 1.52
CHD4-214ENST00000545942 KPNA7A9QM74 516 aa24.54■■□□□ 1.52
CHD4-214ENST00000545942 TULP1O00294 542 aaPredicted RBP24.54■■□□□ 1.52
CHD4-214ENST00000545942 CUTAO60888 179 aa24.54■■□□□ 1.52
CHD4-214ENST00000545942 PRPF6O94906 941 aaKnown RBP24.54■■□□□ 1.52
CHD4-214ENST00000545942 PNPLA4P41247 253 aa24.54■■□□□ 1.52
CHD4-214ENST00000545942 TFAMQ00059 246 aaKnown RBP24.54■■□□□ 1.52
CHD4-214ENST00000545942 TEAD2Q15562 447 aa24.54■■□□□ 1.52
CHD4-214ENST00000545942 SLC39A12Q504Y0 691 aa24.54■■□□□ 1.52
CHD4-214ENST00000545942 FOXD4L5Q5VV16 416 aaPredicted RBP24.54■■□□□ 1.52
CHD4-214ENST00000545942 TMC8Q8IU68 726 aa24.54■■□□□ 1.52
CHD4-214ENST00000545942 SHKBP1Q8TBC3 707 aa24.54■■□□□ 1.52
CHD4-214ENST00000545942 FOXD4L4Q8WXT5 416 aaPredicted RBP24.54■■□□□ 1.52
CHD4-214ENST00000545942 DNASE1L2Q92874 299 aa24.54■■□□□ 1.52
CHD4-214ENST00000545942 NKD2Q969F2 451 aaPredicted RBP24.54■■□□□ 1.52
CHD4-214ENST00000545942 BORCS6Q96GS4 357 aa24.54■■□□□ 1.52
CHD4-214ENST00000545942 CBWD1Q9BRT8 395 aa24.54■■□□□ 1.52
CHD4-214ENST00000545942 TRMT61BQ9BVS5 477 aaKnown RBP24.54■■□□□ 1.52
CHD4-214ENST00000545942 LRRC3Q9BY71 257 aa24.54■■□□□ 1.52
CHD4-214ENST00000545942 OSBPL6Q9BZF3 934 aa24.54■■□□□ 1.52
CHD4-214ENST00000545942 ZCWPW1Q9H0M4 648 aa24.54■■□□□ 1.52
CHD4-214ENST00000545942 EXTL3O43909 919 aa24.53■■□□□ 1.52
CHD4-214ENST00000545942 ZSCAN22P10073 491 aaPredicted RBP24.53■■□□□ 1.52
CHD4-214ENST00000545942 GLULP15104 373 aa24.53■■□□□ 1.52
CHD4-214ENST00000545942 WNT7BP56706 349 aa24.53■■□□□ 1.52
CHD4-214ENST00000545942 AMPD3Q01432 767 aa24.53■■□□□ 1.52
CHD4-214ENST00000545942 GRM2Q14416 872 aa24.53■■□□□ 1.52
CHD4-214ENST00000545942 UBXN2BQ14CS0 331 aa24.53■■□□□ 1.52
CHD4-214ENST00000545942 WSCD1Q658N2 575 aa24.53■■□□□ 1.52
CHD4-214ENST00000545942 TPRG1Q6ZUI0 275 aa24.53■■□□□ 1.52
CHD4-214ENST00000545942 ASCL5Q7RTU5 278 aa24.53■■□□□ 1.52
CHD4-214ENST00000545942 TTC9BQ8N6N2 239 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms