RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 SLC1A5Q15758 541 aa13.52□□□□□ -0.24
PDZD4-209ENST00000544474 GRAMD4Q6IC98 578 aa13.52□□□□□ -0.24
PDZD4-209ENST00000544474 SLC47A2Q86VL8 602 aa13.52□□□□□ -0.24
PDZD4-209ENST00000544474 SLC13A5Q86YT5 568 aaPredicted RBP13.52□□□□□ -0.24
PDZD4-209ENST00000544474 NME8Q8N427 588 aa13.52□□□□□ -0.24
PDZD4-209ENST00000544474 POU5F2Q8N7G0 328 aa13.52□□□□□ -0.24
PDZD4-209ENST00000544474 PYDC1Q8WXC3 89 aa13.52□□□□□ -0.24
PDZD4-209ENST00000544474 TCHPQ9BT92 498 aa13.52□□□□□ -0.24
PDZD4-209ENST00000544474 TYW1Q9NV66 732 aaKnown RBP13.52□□□□□ -0.24
PDZD4-209ENST00000544474 ARL8BQ9NVJ2 186 aa13.52□□□□□ -0.24
PDZD4-209ENST00000544474 PARP2Q9UGN5 583 aa13.52□□□□□ -0.24
PDZD4-209ENST00000544474 DIS3Q9Y2L1 958 aaKnown RBP13.52□□□□□ -0.24
PDZD4-209ENST00000544474 IKBKGQ9Y6K9 419 aa13.52□□□□□ -0.24
PDZD4-209ENST00000544474 TOGARAM1Q9Y4F4 1720 aa13.52□□□□□ -0.24
PDZD4-209ENST00000544474 PODXLO00592 558 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 TBX10O75333 385 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 CYP1A1P04798 512 aaPredicted RBP13.52□□□□□ -0.25
PDZD4-209ENST00000544474 AKR1B1P15121 316 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 ANXA13P27216 316 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 OCRLQ01968 901 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 ZNF394Q53GI3 561 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 UTS2BQ765I0 119 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 SLFN12Q8IYM2 578 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 TMEM117Q9H0C3 514 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 NINJ2Q9NZG7 142 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 EMSYQ7Z589 1322 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 PITPNM2Q9BZ72 1349 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 STRCP1A6NGW2 1772 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 MYOCOSA0A1B0GUC4 107 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 NELFEP18615 380 aaKnown RBP13.52□□□□□ -0.25
PDZD4-209ENST00000544474 AMPD1P23109 780 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 RRM1P23921 792 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 MSX2P35548 267 aaPredicted RBP13.52□□□□□ -0.25
PDZD4-209ENST00000544474 LMNB2Q03252 620 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 DHX34Q14147 1143 aaKnown RBP13.52□□□□□ -0.25
PDZD4-209ENST00000544474 EPHA7Q15375 998 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 ACSBG2Q5FVE4 666 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 CGB2Q6NT52 195 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 RIBC1Q8N443 379 aaPredicted RBP13.52□□□□□ -0.25
PDZD4-209ENST00000544474 ZSWIM2Q8NEG5 633 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 GSDMBQ8TAX9 411 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 ABHD8Q96I13 439 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 ZNF180Q9UJW8 692 aa13.52□□□□□ -0.25
PDZD4-209ENST00000544474 RALAP11233 206 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 NPEPPSP55786 919 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 HPCAP84074 193 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 NFIAQ12857 509 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 GPS1Q13098 491 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 GIT2Q14161 759 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 KCTD21Q4G0X4 260 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 PPP6R3Q5H9R7 873 aaPredicted RBP13.51□□□□□ -0.25
PDZD4-209ENST00000544474 LRRC74BQ6ZQY2 392 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 SLFN11Q7Z7L1 901 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 RASSF3Q86WH2 238 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 ZFPM1Q8IX07 1006 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 ST13P4Q8IZP2 240 aaPredicted RBP13.51□□□□□ -0.25
PDZD4-209ENST00000544474 AGPAT1Q99943 283 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 ZNF395Q9H8N7 513 aaPredicted RBP13.51□□□□□ -0.25
PDZD4-209ENST00000544474 ARHGEF38Q9NXL2 777 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 TRAF3IP3Q9Y228 551 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 RABGAP1Q9Y3P9 1069 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 PCDHA2Q9Y5H9 948 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 SGK1O00141 431 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 TTLL1O95922 423 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 SERPINB2P05120 415 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 TMEM253P0C7T8 217 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 VAV1P15498 845 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 SSTR1P30872 391 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 HOXD12P35452 270 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 PSMC2P35998 433 aaKnown RBP13.51□□□□□ -0.25
PDZD4-209ENST00000544474 GPC5P78333 572 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 PDIA2Q13087 525 aaKnown RBP13.51□□□□□ -0.25
PDZD4-209ENST00000544474 GSTA3Q16772 222 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 ARSHQ5FYA8 562 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 ZSWIM1Q9BR11 485 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 RTFDC1Q9BY42 306 aaPredicted RBP13.51□□□□□ -0.25
PDZD4-209ENST00000544474 ANO3Q9BYT9 981 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 ANLNQ9NQW6 1124 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 TCEAL9Q9UHQ7 104 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 MAGED2Q9UNF1 606 aaPredicted RBP13.51□□□□□ -0.25
PDZD4-209ENST00000544474 TMEM150BA6NC51 233 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 PIK3R2O00459 728 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 ZBTB5O15062 677 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 LSM1O15116 133 aaKnown RBP13.51□□□□□ -0.25
PDZD4-209ENST00000544474 PDE5AO76074 875 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 TTC4O95801 387 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 FMO5P49326 533 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 PHEXP78562 749 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 ZNF543Q08ER8 600 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 CLUL1Q15846 466 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 ARHGEF19Q8IW93 802 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 RAB3IL1Q8TBN0 382 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 NAT14Q8WUY8 206 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 ARPC5LQ9BPX5 153 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 STXBP5LQ9Y2K9 1186 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 TDRKHQ9Y2W6 561 aaKnown RBP13.51□□□□□ -0.25
PDZD4-209ENST00000544474 CEP350Q5VT06 3117 aa13.51□□□□□ -0.25
PDZD4-209ENST00000544474 SYNGAP1Q96PV0 1343 aa13.5□□□□□ -0.25
PDZD4-209ENST00000544474 ROBO3Q96MS0 1386 aa13.5□□□□□ -0.25
PDZD4-209ENST00000544474 A0A1B0GUL6 1792 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms