RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 RNF169Q8NCN4 708 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 TMIEQ8NEW7 156 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 ARL8AQ96BM9 186 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 TRIM43Q96BQ3 446 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-207ENST00000544052 SNX22Q96L94 193 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 ZNF512Q96ME7 567 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-207ENST00000544052 AS3MTQ9HBK9 375 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 JKAMPQ9P055 326 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 MAGED2Q9UNF1 606 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-207ENST00000544052 TBC1D30Q9Y2I9 924 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 KIF13AQ9H1H9 1805 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 AGFG2O95081 481 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 PRSS23O95084 383 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 SNRPA1P09661 255 aaKnown RBP4.47□□□□□ -1.69
SCFD1-207ENST00000544052 RARBP10826 455 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 HABP2Q14520 560 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-207ENST00000544052 BMT2Q1RMZ1 405 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 HSP90AB4PQ58FF6 505 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 UNC13DQ70J99 1090 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 ZNF365Q70YC5 407 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 TXLNBQ8N3L3 684 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 MYCT1Q8N699 235 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 OR56A3Q8NH54 315 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 NEIL1Q96FI4 390 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-207ENST00000544052 LRRC37BQ96QE4 947 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 COLEC11Q9BWP8 271 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 TTLL2Q9BWV7 592 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 CFAP97Q9P2B7 532 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 OAZ3Q9UMX2 235 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 CEP83Q9Y592 693 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 GRIN2AQ12879 1464 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 NUP160Q12769 1436 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 B5MCH6 92 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 HAUS5O94927 633 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 FGAP02671 866 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 MT-ND5P03915 603 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 CR2P20023 1033 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 TECP42680 631 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 SLC11A2P49281 568 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 RENBPP51606 427 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 ZNF135P52742 658 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-207ENST00000544052 UCP3P55916 312 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 STARD3Q14849 445 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 PUM3Q15397 648 aaKnown RBP4.47□□□□□ -1.69
SCFD1-207ENST00000544052 FAM111BQ6SJ93 734 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 FAM124AQ86V42 546 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 C1QL4Q86Z23 238 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 LRRC56Q8IYG6 542 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-207ENST00000544052 DNAJC5GQ8N7S2 189 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 ZNF527Q8NB42 609 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 PPM1EQ8WY54 764 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 CCT6BQ92526 530 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 IQCDQ96DY2 449 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 LRRC46Q96FV0 321 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 SCLT1Q96NL6 688 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 STK31Q9BXU1 1019 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 TBC1D23Q9NUY8 699 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 MYO1AQ9UBC5 1043 aa4.47□□□□□ -1.69
SCFD1-207ENST00000544052 RUSC2Q8N2Y8 1516 aa4.46□□□□□ -1.69
SCFD1-207ENST00000544052 E9PLN8 166 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 PYCARD-AS1I3L0S3 204 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 M0QYG6 137 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 ADAMTS3O15072 1205 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 NPHP1O15259 732 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 PJA2O43164 708 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 NOBOXO60393 691 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 PPFIA4O75335 1185 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 KIF20AO95235 890 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 POMCP01189 267 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 AMHP03971 560 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 GNAI2P04899 355 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 ITGB1P05556 798 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 IL1R1P14778 569 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 EEF1GP26641 437 aaKnown RBP4.46□□□□□ -1.7
SCFD1-207ENST00000544052 PDIA3P30101 505 aaKnown RBP4.46□□□□□ -1.7
SCFD1-207ENST00000544052 PTTG1IPP53801 180 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 KIAA2012Q0VF49 1180 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 GALNT1Q10472 559 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-207ENST00000544052 CCDC38Q502W7 563 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 ATXN7L2Q5T6C5 722 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-207ENST00000544052 DCAF12L1Q5VU92 463 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 LMBRD2Q68DH5 695 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-207ENST00000544052 USP37Q86T82 979 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 PDSS2Q86YH6 399 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 SIAH1Q8IUQ4 282 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 ELOA2Q8IYF1 753 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-207ENST00000544052 SLC17A8Q8NDX2 589 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 NLGN4YQ8NFZ3 816 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-207ENST00000544052 ZNF566Q969W8 418 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 TMEM41AQ96HV5 264 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 PHACTR3Q96KR7 559 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 VKORC1Q9BQB6 163 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 CPEB1Q9BZB8 566 aaKnown RBP4.46□□□□□ -1.7
SCFD1-207ENST00000544052 ZNF518BQ9C0D4 1074 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 CHST8Q9H2A9 424 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 SPON1Q9HCB6 807 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 ITGB1BP2Q9UKP3 347 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 MAN2B2Q9Y2E5 1009 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 ADAMTS20P59510 1910 aa4.46□□□□□ -1.7
SCFD1-207ENST00000544052 WRNQ14191 1432 aaPredicted RBP eCLIP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms