RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 LRSAM1Q6UWE0 723 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 PALB2Q86YC2 1186 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 MRPL43Q8N983 215 aaKnown RBP6.78□□□□□ -1.32
LTBR-212ENST00000543542 FBXL13Q8NEE6 735 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 TAF4BQ92750 862 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 SLC35C1Q96A29 364 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 PCMTD1Q96MG8 357 aaPredicted RBP6.78□□□□□ -1.32
LTBR-212ENST00000543542 BPIFA3Q9BQP9 254 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 TUBGCP2Q9BSJ2 902 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 ANP32EQ9BTT0 268 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 PI4K2AQ9BTU6 479 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 VN1R3Q9BXE9 311 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 DNAI2Q9GZS0 605 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 SNX25Q9H3E2 840 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 RAB20Q9NX57 234 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 TAB2Q9NYJ8 693 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 SIX4Q9UIU6 781 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 SCN1AP35498 2009 aa6.77□□□□□ -1.32
LTBR-212ENST00000543542 CHD7Q9P2D1 2997 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 FSD2A1L4K1 749 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 C2orf71A6NGG8 1288 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 M0QZQ0 153 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 FSCN2O14926 492 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 SPTLC1O15269 473 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 VNN1O95497 513 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 SERPINC1P01008 464 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 CNPP09543 421 aaKnown RBP6.77□□□□□ -1.33
LTBR-212ENST00000543542 CD58P19256 250 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 TYMPP19971 482 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 ELF1P32519 619 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 OR1D2P34982 312 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 LHX1P48742 406 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 NDUFV1P49821 464 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 MARSP56192 900 aaKnown RBP6.77□□□□□ -1.33
LTBR-212ENST00000543542 NOP14P78316 857 aaKnown RBP6.77□□□□□ -1.33
LTBR-212ENST00000543542 TSPY1Q01534 308 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 LRMPQ12912 555 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 CAMK1Q14012 370 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 FILIP1LQ4L180 1135 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 CBWD6Q4V339 395 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 VWA3BQ502W6 1294 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 CBWD3Q5JTY5 395 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 CBWD5Q5RIA9 395 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 C1orf220Q5T0J3 134 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 FKBP15Q5T1M5 1219 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 KIAA0319Q5VV43 1072 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 WSCD1Q658N2 575 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 SPOPLQ6IQ16 392 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 CD300LGQ6UXG3 332 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 GBP6Q6ZN66 633 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 ADGRD2Q7Z7M1 963 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 PPFIBP1Q86W92 1011 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 TRIM59Q8IWR1 403 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 ADGRF2Q8IZF7 708 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 TMEM86AQ8N2M4 240 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 TOP6BLQ8N6T0 577 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 OR6B3Q8NGW1 331 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 MAFAQ8NHW3 353 aaPredicted RBP6.77□□□□□ -1.33
LTBR-212ENST00000543542 LNX1Q8TBB1 728 aaPredicted RBP6.77□□□□□ -1.33
LTBR-212ENST00000543542 TAS1R2Q8TE23 839 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 PIK3R5Q8WYR1 880 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 ELMO3Q96BJ8 720 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 BORCS6Q96GS4 357 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 NT5C1BQ96P26 610 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 KLHL5Q96PQ7 755 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 MED15Q96RN5 788 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 CDCA3Q99618 268 aaPredicted RBP6.77□□□□□ -1.33
LTBR-212ENST00000543542 FUCA2Q9BTY2 467 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 VPS16Q9H269 839 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 CBX8Q9HC52 389 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 CHST7Q9NS84 486 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 GDAP2Q9NXN4 497 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 DDX43Q9NXZ2 648 aaKnown RBP6.77□□□□□ -1.33
LTBR-212ENST00000543542 CLDND1Q9NY35 253 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 DPP7Q9UHL4 492 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 L1RE1Q9UN81 338 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 POLIQ9UNA4 740 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 CDY1Q9Y6F8 540 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 VWA8A3KMH1 1905 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 ATG2AQ2TAZ0 1938 aa6.77□□□□□ -1.33
LTBR-212ENST00000543542 TSC2P49815 1807 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 TRANK1O15050 2925 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 OR6C75A6NL08 312 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 A8MXQ7 604 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 PRRG1O14668 218 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 P4HA2O15460 535 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 TEX28O15482 410 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 NCK2O43639 380 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 CLASP2O75122 1294 aaKnown RBP6.76□□□□□ -1.33
LTBR-212ENST00000543542 STAU1O95793 577 aaKnown RBP6.76□□□□□ -1.33
LTBR-212ENST00000543542 GLUD1P00367 558 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 PDGFRBP09619 1106 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 SPATA31D3P0C874 917 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 POU3F3P20264 500 aaPredicted RBP6.76□□□□□ -1.33
LTBR-212ENST00000543542 ACAT1P24752 427 aaKnown RBP6.76□□□□□ -1.33
LTBR-212ENST00000543542 PCSK1P29120 753 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 GTF2F1P35269 517 aaKnown RBP eCLIP6.76□□□□□ -1.33
LTBR-212ENST00000543542 GNL1P36915 607 aaPredicted RBP6.76□□□□□ -1.33
LTBR-212ENST00000543542 RAP1GAPP47736 663 aa6.76□□□□□ -1.33
LTBR-212ENST00000543542 AARSP49588 968 aaKnown RBP eCLIP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms