RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 LANCL2Q9NS86 450 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 KIF17Q9P2E2 1029 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 IGSF9Q9P2J2 1179 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 MAGEL2Q9UJ55 1249 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 TMX2Q9Y320 296 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 PAXBP1Q9Y5B6 917 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 PRDM2Q13029 1718 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 KIF13AQ9H1H9 1805 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 ANKRD18BA2A2Z9 1011 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 H0Y858 1186 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 PIP5K1BO14986 540 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 N4BP3O15049 544 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 ORC4O43929 436 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 FSBPO95073 299 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 ABHD16AO95870 558 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 PNLIPP16233 465 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 DDCP20711 480 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 PIK3CGP48736 1102 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 TUBP50607 506 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 PAPOLAP51003 745 aaKnown RBP4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 CTSWP56202 376 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 ATP8B2P98198 1209 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 CD83Q01151 205 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 TLE2Q04725 743 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 ADAM9Q13443 819 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 RAB32Q13637 225 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 HABP2Q14520 560 aaPredicted RBP4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 UBE3CQ15386 1083 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 C19orf54Q5BKX5 351 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 CCDC30Q5VVM6 783 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 ITPRIPL1Q6GPH6 555 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 GRAMD4Q6IC98 578 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 TMC5Q6UXY8 1006 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 ETV3LQ6ZN32 361 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 KRT77Q7Z794 578 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 IRF2BP1Q8IU81 584 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 CPOQ8IVL8 374 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 SDR16C5Q8N3Y7 309 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 GLIS1Q8NBF1 620 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 CCDC150Q8NCX0 1101 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 OR7D4Q8NG98 312 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 HERVK_113Q902F9 699 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 CENPIQ92674 756 aaPredicted RBP4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 RILPL2Q969X0 211 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 MAELQ96JY0 434 aaKnown RBP4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 BARD1Q99728 777 aaKnown RBP4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 CHCHD6Q9BRQ6 235 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 MAGEB5Q9BZ81 275 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 ZNF518BQ9C0D4 1074 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 RNF32Q9H0A6 362 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 SLC6A17Q9H1V8 727 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 BRD9Q9H8M2 597 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 JMJD4Q9H9V9 463 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 PLEKHA5Q9HAU0 1116 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 TMEM8AQ9HCN3 771 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 TLR9Q9NR96 1032 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 TMEM140Q9NV12 185 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 IRAK4Q9NWZ3 460 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 RGL1Q9NZL6 768 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 SAE1Q9UBE0 346 aaPredicted RBP4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 ZNF212Q9UDV6 495 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 SRP68Q9UHB9 627 aaKnown RBP4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 GPR160Q9UJ42 338 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 FEM1BQ9UK73 627 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 AJAP1Q9UKB5 411 aaPredicted RBP4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 DIP2BQ9P265 1576 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 DISP3Q9P2K9 1392 aa4.52□□□□□ -1.69
SFSWAP-211ENST00000542813 MAPKBP1O60336 1514 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 RAD54L2Q9Y4B4 1467 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 PYCARD-AS1I3L0S3 204 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 ASNA1O43681 348 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 MATN4O95460 622 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 CD1AP06126 327 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 GAAP10253 952 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 IL1R1P14778 569 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 HNRNPLP14866 589 aaKnown RBP eCLIP4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 RPS6KB1P23443 525 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 GABRB3P28472 473 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 TRHRP34981 398 aaPredicted RBP4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 BUD31P41223 144 aaPredicted RBP4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 CTXN1P60606 82 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 NKX3-2P78367 333 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 APBA1Q02410 837 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 MTM1Q13496 603 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 TRPC3Q13507 836 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 NR1I3Q14994 352 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 CR1LQ2VPA4 569 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 CCDC184Q52MB2 194 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 ARHGAP15Q53QZ3 475 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 SLC45A4Q5BKX6 768 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 FAM133BQ5BKY9 247 aaKnown RBP4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 WDR45BQ5MNZ6 344 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 KLHL17Q6TDP4 642 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 BRINP3Q76B58 766 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 CXXC5Q7LFL8 322 aaKnown RBP4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 GATAD2AQ86YP4 633 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 DTX3Q8N9I9 347 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 PIK3C3Q8NEB9 887 aa4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 OTUD7AQ8TE49 926 aaPredicted RBP4.51□□□□□ -1.69
SFSWAP-211ENST00000542813 UCMAQ8WVF2 138 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms