RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 REXO2Q9Y3B8 237 aaKnown RBP10.72□□□□□ -0.69
TOP3A-208ENST00000542570 MIF4GDA9UHW6 222 aaKnown RBP10.72□□□□□ -0.69
TOP3A-208ENST00000542570 CYB561D2O14569 222 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 CST8O60676 142 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 PLA2G6O60733 806 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 ARHGAP25P42331 645 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 AP1B1Q10567 949 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 CRHR2Q13324 411 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 GEN1Q17RS7 908 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 ARHGEF18Q6ZSZ5 1173 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 MIB1Q86YT6 1006 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 THEM5Q8N1Q8 247 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 TMEM130Q8N3G9 435 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 GTF3C2Q8WUA4 911 aaPredicted RBP10.72□□□□□ -0.69
TOP3A-208ENST00000542570 ATXN7L3BQ96GX2 97 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 ASNSD1Q9NWL6 643 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 NT5C1B-RDH14C9J2C7 533 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 PDE2AO00408 941 aaPredicted RBP10.72□□□□□ -0.69
TOP3A-208ENST00000542570 ZNF263O14978 683 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 TJP3O95049 919 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 TMEM253P0C7T8 217 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 EZRP15311 586 aaKnown RBP10.72□□□□□ -0.69
TOP3A-208ENST00000542570 ANXA13P27216 316 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 ZNF710Q8N1W2 664 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 EDEM1Q92611 657 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 C18orf25Q96B23 403 aaPredicted RBP10.72□□□□□ -0.69
TOP3A-208ENST00000542570 FAF2Q96CS3 445 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 ADAM2Q99965 735 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 FBXL5Q9UKA1 691 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 SPEF2Q9C093 1822 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 MAFO75444 373 aaPredicted RBP10.71□□□□□ -0.69
TOP3A-208ENST00000542570 HOXA7P31268 230 aaPredicted RBP10.71□□□□□ -0.69
TOP3A-208ENST00000542570 STX2P32856 288 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 MLH1P40692 756 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 MARCKSL1P49006 195 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 RABGGTBP53611 331 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 MXRA7P84157 204 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 KRT17Q04695 432 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 PDCLQ13371 301 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 SEPT6Q14141 434 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 PTGISQ16647 500 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 IQSEC1Q6DN90 963 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 ACAD10Q6JQN1 1059 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 CD99L2Q8TCZ2 262 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 NSMCE1Q8WV22 266 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 MAML3Q96JK9 1138 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 CEP41Q9BYV8 373 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 IP6K2Q9UHH9 426 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 ADGRA3Q8IWK6 1321 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 MARF1Q9Y4F3 1742 aaKnown RBP10.71□□□□□ -0.69
TOP3A-208ENST00000542570 MUTP22033 750 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 SCNN1GP51170 649 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 ARSEP51690 589 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 LRRC14Q15048 493 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 NBPF20Q3BBV1 942 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 SLC7A14Q8TBB6 771 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 TNIP3Q96KP6 325 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 ZNF560Q96MR9 790 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 OSBPL8Q9BZF1 889 aa10.71□□□□□ -0.69
TOP3A-208ENST00000542570 URB1O60287 2271 aaKnown RBP10.71□□□□□ -0.7
TOP3A-208ENST00000542570 SYNGAP1Q96PV0 1343 aa10.71□□□□□ -0.7
TOP3A-208ENST00000542570 E2F8A0AVK6 867 aa10.71□□□□□ -0.7
TOP3A-208ENST00000542570 NCAM1P13591 858 aa10.71□□□□□ -0.7
TOP3A-208ENST00000542570 ADSSP30520 456 aa10.71□□□□□ -0.7
TOP3A-208ENST00000542570 MAP3K7CLP57077 242 aa10.71□□□□□ -0.7
TOP3A-208ENST00000542570 FIGNQ5HY92 759 aa10.71□□□□□ -0.7
TOP3A-208ENST00000542570 HYIQ5T013 277 aa10.71□□□□□ -0.7
TOP3A-208ENST00000542570 PRUNE1Q86TP1 453 aa10.71□□□□□ -0.7
TOP3A-208ENST00000542570 TLR10Q9BXR5 811 aa10.71□□□□□ -0.7
TOP3A-208ENST00000542570 AJAP1Q9UKB5 411 aaPredicted RBP10.71□□□□□ -0.7
TOP3A-208ENST00000542570 NUP188Q5SRE5 1749 aa10.71□□□□□ -0.7
TOP3A-208ENST00000542570 TTLL13PA6NNM8 815 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 RGS20O76081 388 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 CD52P31358 61 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 TAF6P49848 677 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 SLC26A2P50443 739 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 NPLOC4Q8TAT6 608 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 CCDC110Q8TBZ0 833 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 FAM114A2Q9NRY5 505 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 PIH1D1Q9NWS0 290 aaKnown RBP10.7□□□□□ -0.7
TOP3A-208ENST00000542570 KLHL8Q9P2G9 620 aaPredicted RBP10.7□□□□□ -0.7
TOP3A-208ENST00000542570 SALL4Q9UJQ4 1053 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 GTF3C4Q9UKN8 822 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 SLX4Q8IY92 1834 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 GOLGA8RI6L899 631 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 GPR25O00155 361 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 LPXNO60711 386 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 MICALL1Q8N3F8 863 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 TMC2Q8TDI7 906 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 PYROXD1Q8WU10 500 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 CAPNS2Q96L46 248 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 MINDY3Q9H8M7 445 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.7□□□□□ -0.7
TOP3A-208ENST00000542570 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.7□□□□□ -0.7
TOP3A-208ENST00000542570 AIPL1Q9NZN9 384 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 RNF14Q9UBS8 474 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 TSR3Q9UJK0 312 aaKnown RBP10.7□□□□□ -0.7
TOP3A-208ENST00000542570 STRIP2Q9ULQ0 834 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 NID2Q14112 1375 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 F8VP50 259 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms