RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 MKRN4PQ13434 485 aaPredicted RBP10.48□□□□□ -0.73
SS18-205ENST00000542420 SNAPC2Q13487 334 aa10.48□□□□□ -0.73
SS18-205ENST00000542420 PIGHQ14442 188 aaPredicted RBP10.48□□□□□ -0.73
SS18-205ENST00000542420 PTPROQ16827 1216 aa10.48□□□□□ -0.73
SS18-205ENST00000542420 ZNF568Q3ZCX4 644 aa10.48□□□□□ -0.73
SS18-205ENST00000542420 LDLRAD1Q5T700 205 aa10.48□□□□□ -0.73
SS18-205ENST00000542420 MFSD5Q6N075 450 aa10.48□□□□□ -0.73
SS18-205ENST00000542420 GPAT2Q6NUI2 795 aa10.48□□□□□ -0.73
SS18-205ENST00000542420 MICALCLQ6ZW33 695 aa10.48□□□□□ -0.73
SS18-205ENST00000542420 TRMT1LQ7Z2T5 733 aaKnown RBP10.48□□□□□ -0.73
SS18-205ENST00000542420 POLNQ7Z5Q5 900 aa10.48□□□□□ -0.73
SS18-205ENST00000542420 ZDHHC14Q8IZN3 488 aa10.48□□□□□ -0.73
SS18-205ENST00000542420 OR5B17Q8NGF7 314 aa10.48□□□□□ -0.73
SS18-205ENST00000542420 ZNF606Q8WXB4 792 aa10.48□□□□□ -0.73
SS18-205ENST00000542420 OTUD5Q96G74 571 aa10.48□□□□□ -0.73
SS18-205ENST00000542420 DCLK3Q9C098 648 aa10.48□□□□□ -0.73
SS18-205ENST00000542420 PHACTR1Q9C0D0 580 aa10.48□□□□□ -0.73
SS18-205ENST00000542420 ASB7Q9H672 318 aa10.48□□□□□ -0.73
SS18-205ENST00000542420 CYP3A43Q9HB55 503 aa10.48□□□□□ -0.73
SS18-205ENST00000542420 SLC12A6Q9UHW9 1150 aa10.48□□□□□ -0.73
SS18-205ENST00000542420 KAT6AQ92794 2004 aa10.48□□□□□ -0.73
SS18-205ENST00000542420 ADM5C9JUS6 153 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 EBAG9O00559 213 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 TCEA3O75764 348 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 DDNO94850 711 aaPredicted RBP10.47□□□□□ -0.73
SS18-205ENST00000542420 CORO7P57737 925 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 SATB1Q01826 763 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 TRPC3Q13507 836 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 ACAP1Q15027 740 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 TNFAIP8L3Q5GJ75 292 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 ATF7IP2Q5U623 682 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 RHBDF2Q6PJF5 856 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 RNF149Q8NC42 400 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 SNF8Q96H20 258 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 SPATA33Q96N06 139 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 BCO2Q9BYV7 579 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 EPB41L4BQ9H329 900 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 SPON1Q9HCB6 807 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 ACP6Q9NPH0 428 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 TMEM191CA6NGB0 347 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 STRNO43815 780 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 KIF1CO43896 1103 aaKnown RBP10.47□□□□□ -0.73
SS18-205ENST00000542420 ARIH2O95376 493 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 TMEM191BP0C7N4 346 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 ATP5DP30049 168 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 LSP1P33241 339 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 CDC42EP1Q00587 391 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 IFFO1Q0D2I5 559 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 PCBP1Q15365 356 aaKnown RBP eCLIP10.47□□□□□ -0.73
SS18-205ENST00000542420 PTGISQ16647 500 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 LY6KQ17RY6 165 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 APBB1IPQ7Z5R6 666 aaPredicted RBP10.47□□□□□ -0.73
SS18-205ENST00000542420 YTHDF3Q7Z739 585 aaKnown RBP10.47□□□□□ -0.73
SS18-205ENST00000542420 CCDC89Q8N998 374 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 FBXO25Q8TCJ0 367 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 TRAIPQ9BWF2 469 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 MIS12Q9H081 205 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 SNX24Q9Y343 169 aa10.47□□□□□ -0.73
SS18-205ENST00000542420 TLR3O15455 904 aaKnown RBP10.46□□□□□ -0.73
SS18-205ENST00000542420 GH1P01241 217 aa10.46□□□□□ -0.73
SS18-205ENST00000542420 HOXD8P13378 290 aaPredicted RBP10.46□□□□□ -0.73
SS18-205ENST00000542420 P4HA1P13674 534 aa10.46□□□□□ -0.73
SS18-205ENST00000542420 FLT3P36888 993 aa10.46□□□□□ -0.73
SS18-205ENST00000542420 GCLCP48506 637 aaPredicted RBP10.46□□□□□ -0.73
SS18-205ENST00000542420 PLTPP55058 493 aa10.46□□□□□ -0.73
SS18-205ENST00000542420 MBTD1Q05BQ5 628 aa10.46□□□□□ -0.73
SS18-205ENST00000542420 PPP1R7Q15435 360 aa10.46□□□□□ -0.73
SS18-205ENST00000542420 KRT71Q3SY84 523 aa10.46□□□□□ -0.73
SS18-205ENST00000542420 ZBTB41Q5SVQ8 909 aa10.46□□□□□ -0.73
SS18-205ENST00000542420 PPP1R15BQ5SWA1 713 aa10.46□□□□□ -0.73
SS18-205ENST00000542420 SPOPLQ6IQ16 392 aa10.46□□□□□ -0.73
SS18-205ENST00000542420 DPY19L2Q6NUT2 758 aa10.46□□□□□ -0.73
SS18-205ENST00000542420 CCDC91Q7Z6B0 441 aa10.46□□□□□ -0.73
SS18-205ENST00000542420 CEP120Q8N960 986 aa10.46□□□□□ -0.73
SS18-205ENST00000542420 BCAS4Q8TDM0 211 aa10.46□□□□□ -0.73
SS18-205ENST00000542420 CPA5Q8WXQ8 436 aa10.46□□□□□ -0.73
SS18-205ENST00000542420 TCHPQ9BT92 498 aa10.46□□□□□ -0.73
SS18-205ENST00000542420 RPF1Q9H9Y2 349 aaKnown RBP10.46□□□□□ -0.73
SS18-205ENST00000542420 MORF4L1Q9UBU8 362 aa10.46□□□□□ -0.73
SS18-205ENST00000542420 DRG1Q9Y295 367 aaKnown RBP10.46□□□□□ -0.73
SS18-205ENST00000542420 ATP8A1Q9Y2Q0 1164 aa10.46□□□□□ -0.73
SS18-205ENST00000542420 NEU2Q9Y3R4 380 aa10.46□□□□□ -0.73
SS18-205ENST00000542420 C22orf31O95567 290 aa10.46□□□□□ -0.74
SS18-205ENST00000542420 TXNP10599 105 aaKnown RBP10.46□□□□□ -0.74
SS18-205ENST00000542420 PRKG1Q13976 671 aa10.46□□□□□ -0.74
SS18-205ENST00000542420 ZNF699Q32M78 642 aa10.46□□□□□ -0.74
SS18-205ENST00000542420 ZNF792Q3KQV3 632 aa10.46□□□□□ -0.74
SS18-205ENST00000542420 HSDL1Q3SXM5 330 aa10.46□□□□□ -0.74
SS18-205ENST00000542420 LMBRD2Q68DH5 695 aaPredicted RBP10.46□□□□□ -0.74
SS18-205ENST00000542420 PPTC7Q8NI37 304 aa10.46□□□□□ -0.74
SS18-205ENST00000542420 OPTNQ96CV9 577 aa10.46□□□□□ -0.74
SS18-205ENST00000542420 BTBD6Q96KE9 485 aa10.46□□□□□ -0.74
SS18-205ENST00000542420 TSPAN18Q96SJ8 248 aa10.46□□□□□ -0.74
SS18-205ENST00000542420 C11orf70Q9BRQ4 267 aa10.46□□□□□ -0.74
SS18-205ENST00000542420 OSBPL8Q9BZF1 889 aa10.46□□□□□ -0.74
SS18-205ENST00000542420 XYLT2Q9H1B5 865 aa10.46□□□□□ -0.74
SS18-205ENST00000542420 PPCSQ9HAB8 311 aa10.46□□□□□ -0.74
SS18-205ENST00000542420 CISHQ9NSE2 258 aa10.46□□□□□ -0.74
SS18-205ENST00000542420 RNF181Q9P0P0 153 aa10.46□□□□□ -0.74
SS18-205ENST00000542420 KIAA1257Q9ULG3 409 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms