RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 ZNF862O60290 1169 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 WFS1O76024 890 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 CALCAP01258 141 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 NEFHP12036 1026 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 ATP6V1C1P21283 382 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 RWDD2BP57060 319 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 DLG4P78352 724 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 RBBP5Q15291 538 aaKnown RBP9.69□□□□□ -0.86
THBS3-211ENST00000541990 TMED2Q15363 201 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 SEL1L2Q5TEA6 688 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 RHBDF2Q6PJF5 856 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 CCDC60Q8IWA6 550 aaPredicted RBP9.69□□□□□ -0.86
THBS3-211ENST00000541990 MIPEPQ99797 713 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 TRIM7Q9C029 511 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 ABT1Q9ULW3 272 aaKnown RBP9.69□□□□□ -0.86
THBS3-211ENST00000541990 KCNH4Q9UQ05 1017 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 PASKQ96RG2 1323 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 ECEL1O95672 775 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 RPS6KA3P51812 740 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 ITGA8P53708 1063 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 POLGP54098 1239 aaPredicted RBP9.68□□□□□ -0.86
THBS3-211ENST00000541990 CALCOCO2Q13137 446 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 PPP2R5EQ16537 467 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 HP1BP3Q5SSJ5 553 aaPredicted RBP9.68□□□□□ -0.86
THBS3-211ENST00000541990 PHLDB2Q86SQ0 1253 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 RPUSD2Q8IZ73 545 aaKnown RBP9.68□□□□□ -0.86
THBS3-211ENST00000541990 MYCT1Q8N699 235 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 UBL4BQ8N7F7 174 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 CD101Q93033 1021 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 MAGEB18Q96M61 343 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 FGD4Q96M96 766 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 SERPINB12Q96P63 405 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 AGPAT1Q99943 283 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 NMRK1Q9NWW6 199 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 RLFQ13129 1914 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 OTOFQ9HC10 1997 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 CXCL11O14625 94 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 SLC16A3O15427 465 aaKnown RBP9.68□□□□□ -0.86
THBS3-211ENST00000541990 THAP12O43422 761 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 TTC4O95801 387 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 IVDP26440 423 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 ERFP50548 548 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 CYP1B1Q16678 543 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 KHDC1Q4VXA5 237 aaKnown RBP9.68□□□□□ -0.86
THBS3-211ENST00000541990 TRMT10CQ7L0Y3 403 aaKnown RBP9.68□□□□□ -0.86
THBS3-211ENST00000541990 NLRX1Q86UT6 975 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 SYT2Q8N9I0 419 aaPredicted RBP9.68□□□□□ -0.86
THBS3-211ENST00000541990 NRG4Q8WWG1 115 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 MRRFQ96E11 262 aaKnown RBP9.68□□□□□ -0.86
THBS3-211ENST00000541990 ROPN1BQ9BZX4 212 aaPredicted RBP9.68□□□□□ -0.86
THBS3-211ENST00000541990 ROPN1Q9HAT0 212 aaPredicted RBP9.68□□□□□ -0.86
THBS3-211ENST00000541990 METTL14Q9HCE5 456 aaKnown RBP9.68□□□□□ -0.86
THBS3-211ENST00000541990 APEX2Q9UBZ4 518 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 PARP2Q9UGN5 583 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 R3HDM2Q9Y2K5 976 aaKnown RBP9.68□□□□□ -0.86
THBS3-211ENST00000541990 ASB3Q9Y575 518 aa9.68□□□□□ -0.86
THBS3-211ENST00000541990 LRRD1A4D1F6 860 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 CCND2P30279 289 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 HOXA7P31268 230 aaPredicted RBP9.67□□□□□ -0.86
THBS3-211ENST00000541990 GBP1P32455 592 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 SKIV2L2P42285 1042 aaKnown RBP9.67□□□□□ -0.86
THBS3-211ENST00000541990 HSDL1Q3SXM5 330 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 SPRYD7Q5W111 196 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 CYP4F22Q6NT55 531 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 C11orf63Q6NUN7 778 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 LLGL2Q6P1M3 1020 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 DSTYKQ6XUX3 929 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 CAPN12Q6ZSI9 719 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 TRAPPC12Q8WVT3 735 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 PRR11Q96HE9 360 aaPredicted RBP9.67□□□□□ -0.86
THBS3-211ENST00000541990 RUNDC3BQ96NL0 473 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 TXLNGQ9NUQ3 528 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 CPSF2Q9P2I0 782 aaKnown RBP9.67□□□□□ -0.86
THBS3-211ENST00000541990 PHIPQ8WWQ0 1821 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 DOCK3Q8IZD9 2030 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 SPOPO43791 374 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 CSDE1O75534 798 aaKnown RBP9.67□□□□□ -0.86
THBS3-211ENST00000541990 PIAS1O75925 651 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 SGPL1O95470 568 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 GJB1P08034 283 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 KCNA2P16389 499 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 BMT2Q1RMZ1 405 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 C4orf33Q8N1A6 199 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 ERMNQ8TAM6 284 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 DNAJC9Q8WXX5 260 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 FAM136AQ96C01 138 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 RAB3IPQ96QF0 476 aaPredicted RBP9.67□□□□□ -0.86
THBS3-211ENST00000541990 MMP19Q99542 508 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 PCIF1Q9H4Z3 704 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 PHTF1Q9UMS5 762 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 DOCK5Q9H7D0 1870 aa9.67□□□□□ -0.86
THBS3-211ENST00000541990 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.66□□□□□ -0.86
THBS3-211ENST00000541990 GTPBP10A4D1E9 387 aaKnown RBP9.66□□□□□ -0.86
THBS3-211ENST00000541990 RASA4BC9J798 803 aa9.66□□□□□ -0.86
THBS3-211ENST00000541990 RASA4O43374 803 aa9.66□□□□□ -0.86
THBS3-211ENST00000541990 KRT36O76013 467 aa9.66□□□□□ -0.86
THBS3-211ENST00000541990 MYL7Q01449 175 aa9.66□□□□□ -0.86
THBS3-211ENST00000541990 PPP2R5CQ13362 524 aa9.66□□□□□ -0.86
THBS3-211ENST00000541990 ACVR2BQ13705 512 aa9.66□□□□□ -0.86
THBS3-211ENST00000541990 MTERF2Q49AM1 385 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms