RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 PLEKHN1Q494U1 663 aaPredicted RBP6.25□□□□□ -1.41
CPSF7-220ENST00000541963 CCDC178Q5BJE1 867 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 WDR78Q5VTH9 848 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 CREB3L3Q68CJ9 461 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 MFSD6Q6ZSS7 791 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 CENPQQ7L2Z9 268 aaPredicted RBP6.25□□□□□ -1.41
CPSF7-220ENST00000541963 TMC6Q7Z403 805 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 PLEKHH3Q7Z736 793 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 ZBTB46Q86UZ6 589 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 SIAH1Q8IUQ4 282 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 FAM126BQ8IXS8 530 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 SPICE1Q8N0Z3 855 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 CLRN3Q8NCR9 226 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 SOCS4Q8WXH5 440 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 ERCC4Q92889 916 aaPredicted RBP6.25□□□□□ -1.41
CPSF7-220ENST00000541963 ZNF333Q96JL9 665 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 GBP4Q96PP9 640 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 ASPSCR1Q9BZE9 553 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 AASDHPPTQ9NRN7 309 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 SIRT5Q9NXA8 310 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 MTMR4Q9NYA4 1195 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 DTLQ9NZJ0 730 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 USP36Q9P275 1121 aaKnown RBP6.25□□□□□ -1.41
CPSF7-220ENST00000541963 KLHL14Q9P2G3 628 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 GABRQQ9UN88 632 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 TELO2Q9Y4R8 837 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 ZMYM6O95789 1325 aa6.25□□□□□ -1.41
CPSF7-220ENST00000541963 MGAMO43451 1857 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 IGKV6D-41A0A0C4DH26 115 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 SMIM22K7EJ46 135 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 HRKO00198 91 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 ORC4O43929 436 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 ZBED4O75132 1171 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 C4BPAP04003 597 aaKnown RBP6.24□□□□□ -1.41
CPSF7-220ENST00000541963 CYP2B6P20813 491 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 PTX3P26022 381 aaPredicted RBP6.24□□□□□ -1.41
CPSF7-220ENST00000541963 NEK2P51955 445 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 YBX1P67809 324 aaKnown RBP6.24□□□□□ -1.41
CPSF7-220ENST00000541963 CAP1Q01518 475 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 PLS1Q14651 629 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 TARBP2Q15633 366 aaKnown RBP6.24□□□□□ -1.41
CPSF7-220ENST00000541963 IMMTQ16891 758 aaKnown RBP6.24□□□□□ -1.41
CPSF7-220ENST00000541963 FAM47AQ5JRC9 791 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 RRP12Q5JTH9 1297 aaKnown RBP6.24□□□□□ -1.41
CPSF7-220ENST00000541963 AKNAD1Q5T1N1 836 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 VPS53Q5VIR6 699 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 SLFN13Q68D06 897 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 GPR142Q7Z601 462 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 C7orf31Q8N865 590 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 GMCL1P1Q8NEA9 526 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 SHCBP1Q8NEM2 672 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 CHURC1Q8WUH1 139 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 ESR2Q92731 530 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 CEP95Q96GE4 821 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 CCDC136Q96JN2 1154 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 TTC14Q96N46 770 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 ZDHHC5Q9C0B5 715 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 MROH8Q9H579 483 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 PCDH18Q9HCL0 1135 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 TXNRD2Q9NNW7 524 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 TCP11L1Q9NUJ3 509 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 FAM53CQ9NYF3 392 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 FEM1BQ9UK73 627 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 GJD2Q9UKL4 321 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 STX8Q9UNK0 236 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 MRFAP1Q9Y605 127 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 RAD50Q92878 1312 aa6.24□□□□□ -1.41
CPSF7-220ENST00000541963 SLC15A5A6NIM6 579 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 K7ESF4 209 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 MAFGO15525 162 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 NDUFB10O96000 172 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 HMGCRP04035 888 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 GJB1P08034 283 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 ENO2P09104 434 aaPredicted RBP6.23□□□□□ -1.41
CPSF7-220ENST00000541963 MYBL2P10244 700 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 CCL5P13501 91 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 NCAM1P13591 858 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 ZKSCAN1P17029 563 aaPredicted RBP6.23□□□□□ -1.41
CPSF7-220ENST00000541963 JUNBP17275 347 aaPredicted RBP6.23□□□□□ -1.41
CPSF7-220ENST00000541963 SLC1A4P43007 532 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 SRSF3P84103 164 aaKnown RBP6.23□□□□□ -1.41
CPSF7-220ENST00000541963 TRDNQ13061 729 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 KLF1Q13351 362 aaPredicted RBP6.23□□□□□ -1.41
CPSF7-220ENST00000541963 SEC23AQ15436 765 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 PTPN21Q16825 1174 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 FAM83BQ5T0W9 1011 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 PGM2L1Q6PCE3 622 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 CASC1Q6TDU7 716 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 CD300LDQ6UXZ3 194 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 ESPNLQ6ZVH7 1005 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 CBLL1Q75N03 491 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 ZNF605Q86T29 641 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 DPP9Q86TI2 863 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 ZNF589Q86UQ0 364 aaPredicted RBP6.23□□□□□ -1.41
CPSF7-220ENST00000541963 FAM160B2Q86V87 743 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 IQCA1Q86XH1 822 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 PHYKPLQ8IUZ5 450 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 FAM168AQ92567 244 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 CHMP4CQ96CF2 233 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 TUBGCP5Q96RT8 1024 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms