RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 RAB33AQ14088 237 aa9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 SLC5A9Q2M3M2 681 aa9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 HEATR6Q6AI08 1181 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 IL31Q6EBC2 164 aa9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 PRR23CQ6ZRP0 262 aa9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 UNC13DQ70J99 1090 aa9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 TAS1R3Q7RTX0 852 aa9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 ZNF720Q7Z2F6 126 aa9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 HAUS6Q7Z4H7 955 aa9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 SFR1Q86XK3 245 aa9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 CELF5Q8N6W0 485 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 DNASE1L2Q92874 299 aa9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 ELSPBP1Q96BH3 223 aa9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 CORO1BQ9BR76 489 aa9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 KIFC3Q9BVG8 833 aa9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 TRMT61BQ9BVS5 477 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 CXCL16Q9H2A7 254 aa9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 CHRDQ9H2X0 955 aa9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 ZHX3Q9H4I2 956 aa9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 ZFP14Q9HCL3 533 aa9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 GDAQ9Y2T3 454 aa9.47□□□□□ -0.89
CLSTN3-212ENST00000541770 COL4A2P08572 1712 aa9.46□□□□□ -0.89
CLSTN3-212ENST00000541770 CHURC1-FNTBB4DL54 471 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 I3L4J1 428 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 K7ENM7 598 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 PTGESO14684 152 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 KLRC4O43908 158 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 PPP1R37O75864 691 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 RECQL4O94761 1208 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 B3GAT3O94766 335 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 TKTP29401 623 aaKnown RBP9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 CXCL12P48061 93 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 FNTBP49356 437 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 SATB1Q01826 763 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 DPYDQ12882 1025 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 STRN3Q13033 797 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 PRPF4BQ13523 1007 aaKnown RBP9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 ALCAMQ13740 583 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 AASDHQ4L235 1098 aaPredicted RBP9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 GLRA4Q5JXX5 417 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 GRAMD1CQ8IYS0 662 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 IRF7Q92985 503 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 HVCN1Q96D96 273 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 ADPGKQ9BRR6 497 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 STRA6Q9BX79 667 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 BLZF1Q9H2G9 400 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 LMBRD1Q9NUN5 540 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 GDE1Q9NZC3 331 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 MTRRQ9UBK8 725 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 HOOK1Q9UJC3 728 aaKnown RBP9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 TBX20Q9UMR3 447 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 USP20Q9Y2K6 914 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 PIAS3Q9Y6X2 628 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 KIF26AQ9ULI4 1882 aaPredicted RBP9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 CEP250Q9BV73 2442 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 FRYLO94915 3013 aa9.46□□□□□ -0.9
CLSTN3-212ENST00000541770 KMT2BQ9UMN6 2715 aaPredicted RBP9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 N4BP3O15049 544 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 PIGRP01833 764 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 POU2F2P09086 479 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 FGFR3P22607 806 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 IGFBP6P24592 240 aaPredicted RBP9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 CCNE1P24864 410 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 CASP1P29466 404 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 NMT1P30419 496 aaKnown RBP9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 BRCC3P46736 316 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 CLCNKBP51801 687 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 PSMD2Q13200 908 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 KCNB1Q14721 858 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 POSTNQ15063 836 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 CSRP2Q16527 193 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 FAM78AQ5JUQ0 283 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 FAM26FQ5R3K3 315 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 NT5DC1Q5TFE4 455 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 POTEHQ6S545 545 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 ZPBP2Q6X784 338 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 STXBP4Q6ZWJ1 553 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 PDZD4Q76G19 769 aaPredicted RBP9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 CEP68Q76N32 757 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 MAP4K3Q8IVH8 894 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 SPATA20Q8TB22 786 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 CSGALNACT1Q8TDX6 532 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 TCEAL4Q96EI5 215 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 ACO2Q99798 780 aaKnown RBP9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 MRPL4Q9BYD3 311 aaKnown RBP9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 PDZD7Q9H5P4 517 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 MRPL44Q9H9J2 332 aaKnown RBP9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 CYP4F11Q9HBI6 524 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 ZNF334Q9HCZ1 680 aaPredicted RBP9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 PTPRHQ9HD43 1115 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 ANGPTL2Q9UKU9 493 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 TNFSF13BQ9Y275 285 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 PCDHB13Q9Y5F0 798 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 ZMYM2Q9UBW7 1377 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 NCOR2Q9Y618 2525 aa9.45□□□□□ -0.9
CLSTN3-212ENST00000541770 GREB1Q4ZG55 1949 aa9.44□□□□□ -0.9
CLSTN3-212ENST00000541770 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.44□□□□□ -0.9
CLSTN3-212ENST00000541770 SHISA7A6NL88 538 aa9.44□□□□□ -0.9
CLSTN3-212ENST00000541770 TTLL13PA6NNM8 815 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms