RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 TYRO3Q06418 890 aa20.17■□□□□ 0.82
VPS33A-205ENST00000541169 ADAM15Q13444 863 aa20.17■□□□□ 0.82
VPS33A-205ENST00000541169 SKIV2LQ15477 1246 aaKnown RBP20.17■□□□□ 0.82
VPS33A-205ENST00000541169 AAK1Q2M2I8 961 aa20.17■□□□□ 0.82
VPS33A-205ENST00000541169 CTC1Q2NKJ3 1217 aa20.17■□□□□ 0.82
VPS33A-205ENST00000541169 CTXN3Q4LDR2 81 aa20.17■□□□□ 0.82
VPS33A-205ENST00000541169 DCAF17Q5H9S7 520 aaPredicted RBP20.17■□□□□ 0.82
VPS33A-205ENST00000541169 C1orf220Q5T0J3 134 aa20.17■□□□□ 0.82
VPS33A-205ENST00000541169 FBXL13Q8NEE6 735 aa20.17■□□□□ 0.82
VPS33A-205ENST00000541169 HLA-CQ95604 372 aa20.17■□□□□ 0.82
VPS33A-205ENST00000541169 SLC35C1Q96A29 364 aa20.17■□□□□ 0.82
VPS33A-205ENST00000541169 DNAI2Q9GZS0 605 aa20.17■□□□□ 0.82
VPS33A-205ENST00000541169 PLEKHA4Q9H4M7 779 aa20.17■□□□□ 0.82
VPS33A-205ENST00000541169 DZANK1Q9NVP4 752 aa20.17■□□□□ 0.82
VPS33A-205ENST00000541169 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.17■□□□□ 0.82
VPS33A-205ENST00000541169 SCN1AP35498 2009 aa20.17■□□□□ 0.82
VPS33A-205ENST00000541169 VWA8A3KMH1 1905 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 I3L4J1 428 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 SPTLC1O15269 473 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 GLUD1P00367 558 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 CST3P01034 146 aaPredicted RBP20.16■□□□□ 0.82
VPS33A-205ENST00000541169 HOXB8P17481 243 aaPredicted RBP20.16■□□□□ 0.82
VPS33A-205ENST00000541169 PIK3CAP42336 1068 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 GCLMP48507 274 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 PPP3CAQ08209 521 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 RAB33AQ14088 237 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 NFKBIBQ15653 356 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 CCDC85BQ15834 202 aaPredicted RBP20.16■□□□□ 0.82
VPS33A-205ENST00000541169 ZNF699Q32M78 642 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 WDR72Q3MJ13 1102 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 ZNF667Q5HYK9 610 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 TPGS2Q68CL5 300 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 ADGRD2Q7Z7M1 963 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 RBM23Q86U06 439 aaKnown RBP20.16■□□□□ 0.82
VPS33A-205ENST00000541169 TRIM59Q8IWR1 403 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 AUTS2Q8WXX7 1259 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 BPIFA3Q9BQP9 254 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 COQ4Q9Y3A0 265 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 SNX9Q9Y5X1 595 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 CDH23Q9H251 3354 aa20.16■□□□□ 0.82
VPS33A-205ENST00000541169 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.15■□□□□ 0.82
VPS33A-205ENST00000541169 TBC1D4O60343 1298 aa20.15■□□□□ 0.82
VPS33A-205ENST00000541169 CSPG5O95196 566 aa20.15■□□□□ 0.82
VPS33A-205ENST00000541169 TRIM49P0CI25 452 aa20.15■□□□□ 0.82
VPS33A-205ENST00000541169 TRIM49CP0CI26 452 aa20.15■□□□□ 0.82
VPS33A-205ENST00000541169 EEF1GP26641 437 aaKnown RBP20.15■□□□□ 0.82
VPS33A-205ENST00000541169 CLCN4P51793 760 aa20.15■□□□□ 0.82
VPS33A-205ENST00000541169 MYL6P60660 151 aa20.15■□□□□ 0.82
VPS33A-205ENST00000541169 MYL5Q02045 173 aa20.15■□□□□ 0.82
VPS33A-205ENST00000541169 KCNC3Q14003 757 aa20.15■□□□□ 0.82
VPS33A-205ENST00000541169 PUS10Q3MIT2 529 aaKnown RBP20.15■□□□□ 0.82
VPS33A-205ENST00000541169 PRSS55Q6UWB4 352 aaPredicted RBP20.15■□□□□ 0.82
VPS33A-205ENST00000541169 LIMS2Q7Z4I7 341 aa20.15■□□□□ 0.82
VPS33A-205ENST00000541169 TTC39CQ8N584 583 aa20.15■□□□□ 0.82
VPS33A-205ENST00000541169 ZNF461Q8TAF7 563 aa20.15■□□□□ 0.82
VPS33A-205ENST00000541169 B3GALT6Q96L58 329 aa20.15■□□□□ 0.82
VPS33A-205ENST00000541169 CLSTN3Q9BQT9 956 aa20.15■□□□□ 0.82
VPS33A-205ENST00000541169 XYLT2Q9H1B5 865 aa20.15■□□□□ 0.82
VPS33A-205ENST00000541169 IGFLR1Q9H665 355 aa20.15■□□□□ 0.82
VPS33A-205ENST00000541169 TACC1O75410 805 aa20.14■□□□□ 0.81
VPS33A-205ENST00000541169 ASS1P00966 412 aaKnown RBP20.14■□□□□ 0.81
VPS33A-205ENST00000541169 HLA-DRAP01903 254 aa20.14■□□□□ 0.81
VPS33A-205ENST00000541169 TRIM21P19474 475 aaKnown RBP20.14■□□□□ 0.81
VPS33A-205ENST00000541169 IGFBP6P24592 240 aaPredicted RBP20.14■□□□□ 0.81
VPS33A-205ENST00000541169 PCSK1P29120 753 aa20.14■□□□□ 0.81
VPS33A-205ENST00000541169 MYL7Q01449 175 aa20.14■□□□□ 0.81
VPS33A-205ENST00000541169 UVSSAQ2YD98 709 aa20.14■□□□□ 0.81
VPS33A-205ENST00000541169 WDR44Q5JSH3 913 aa20.14■□□□□ 0.81
VPS33A-205ENST00000541169 CYP26C1Q6V0L0 522 aa20.14■□□□□ 0.81
VPS33A-205ENST00000541169 ANKRD20A12PQ8NF67 263 aa20.14■□□□□ 0.81
VPS33A-205ENST00000541169 SLC22A17Q8WUG5 538 aa20.14■□□□□ 0.81
VPS33A-205ENST00000541169 CNOT6LQ96LI5 555 aaKnown RBP20.14■□□□□ 0.81
VPS33A-205ENST00000541169 MED15Q96RN5 788 aa20.14■□□□□ 0.81
VPS33A-205ENST00000541169 MMS19Q96T76 1030 aa20.14■□□□□ 0.81
VPS33A-205ENST00000541169 ACBD6Q9BR61 282 aa20.14■□□□□ 0.81
VPS33A-205ENST00000541169 RAB20Q9NX57 234 aa20.14■□□□□ 0.81
VPS33A-205ENST00000541169 CLDND1Q9NY35 253 aa20.14■□□□□ 0.81
VPS33A-205ENST00000541169 HSFX1Q9UBD0 423 aa20.14■□□□□ 0.81
VPS33A-205ENST00000541169 FBXL5Q9UKA1 691 aa20.14■□□□□ 0.81
VPS33A-205ENST00000541169 PCDHGC5Q9Y5F6 944 aa20.14■□□□□ 0.81
VPS33A-205ENST00000541169 HCFC2Q9Y5Z7 792 aa20.14■□□□□ 0.81
VPS33A-205ENST00000541169 CDY1Q9Y6F8 540 aa20.14■□□□□ 0.81
VPS33A-205ENST00000541169 SMTNL1A8MU46 457 aa20.13■□□□□ 0.81
VPS33A-205ENST00000541169 PER2O15055 1255 aa20.13■□□□□ 0.81
VPS33A-205ENST00000541169 VNN1O95497 513 aa20.13■□□□□ 0.81
VPS33A-205ENST00000541169 TPM2P07951 284 aa20.13■□□□□ 0.81
VPS33A-205ENST00000541169 OR1D2P34982 312 aa20.13■□□□□ 0.81
VPS33A-205ENST00000541169 FMO5P49326 533 aa20.13■□□□□ 0.81
VPS33A-205ENST00000541169 SMYD5Q6GMV2 418 aa20.13■□□□□ 0.81
VPS33A-205ENST00000541169 CCDC149Q6ZUS6 474 aa20.13■□□□□ 0.81
VPS33A-205ENST00000541169 PDCL2Q8N4E4 241 aa20.13■□□□□ 0.81
VPS33A-205ENST00000541169 C2orf15Q8WU43 125 aaKnown RBP20.13■□□□□ 0.81
VPS33A-205ENST00000541169 PPM1EQ8WY54 764 aa20.13■□□□□ 0.81
VPS33A-205ENST00000541169 FAM50BQ9Y247 325 aa20.13■□□□□ 0.81
VPS33A-205ENST00000541169 NFE2L3Q9Y4A8 694 aa20.13■□□□□ 0.81
VPS33A-205ENST00000541169 GABRDO14764 452 aa20.12■□□□□ 0.81
VPS33A-205ENST00000541169 AFPP02771 609 aaKnown RBP20.12■□□□□ 0.81
VPS33A-205ENST00000541169 MTIF2P46199 727 aaKnown RBP20.12■□□□□ 0.81
VPS33A-205ENST00000541169 KCNH2Q12809 1159 aa20.12■□□□□ 0.81
VPS33A-205ENST00000541169 MAPRE1Q15691 268 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms