RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 DENND4CQ5VZ89 1909 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 ODC1P11926 461 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 PSMC3P17980 439 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 NMT1P30419 496 aaKnown RBP15.33■□□□□ 0.04
SNHG1-213ENST00000540725 GDI1P31150 447 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 ABCD1P33897 745 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 VIPR2P41587 438 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 LILRA4P59901 499 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 GTF2BQ00403 316 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 DUSP4Q13115 394 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 FZD5Q13467 585 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 MYBPC2Q14324 1141 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 SF3A1Q15459 793 aaKnown RBP15.33■□□□□ 0.04
SNHG1-213ENST00000540725 TEAD2Q15562 447 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 KIAA2013Q8IYS2 634 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 SUMF1Q8NBK3 374 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 ZSCAN18Q8TBC5 510 aaPredicted RBP15.33■□□□□ 0.04
SNHG1-213ENST00000540725 DEPDC1BQ8WUY9 529 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 LARP4BQ92615 738 aaKnown RBP15.33■□□□□ 0.04
SNHG1-213ENST00000540725 RUBCNQ92622 972 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 SENP8Q96LD8 212 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 DNAJC25Q9H1X3 360 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 SLITRK6Q9H5Y7 841 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 TRPV4Q9HBA0 871 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 ZNF334Q9HCZ1 680 aaPredicted RBP15.33■□□□□ 0.04
SNHG1-213ENST00000540725 NDRG2Q9UN36 371 aaKnown RBP15.33■□□□□ 0.04
SNHG1-213ENST00000540725 NCOR2Q9Y618 2525 aa15.33■□□□□ 0.04
SNHG1-213ENST00000540725 KIF26AQ9ULI4 1882 aaPredicted RBP15.32■□□□□ 0.04
SNHG1-213ENST00000540725 NCANO14594 1321 aa15.32■□□□□ 0.04
SNHG1-213ENST00000540725 MTMR11A4FU01 709 aa15.32■□□□□ 0.04
SNHG1-213ENST00000540725 ANKRD63C9JTQ0 380 aa15.32■□□□□ 0.04
SNHG1-213ENST00000540725 MAN2B1O00754 1011 aa15.32■□□□□ 0.04
SNHG1-213ENST00000540725 SPTLC1O15269 473 aa15.32■□□□□ 0.04
SNHG1-213ENST00000540725 NFICP08651 508 aa15.32■□□□□ 0.04
SNHG1-213ENST00000540725 EPHB3P54753 998 aa15.32■□□□□ 0.04
SNHG1-213ENST00000540725 TMEM132DQ14C87 1099 aa15.32■□□□□ 0.04
SNHG1-213ENST00000540725 C9orf57Q5W0N0 161 aa15.32■□□□□ 0.04
SNHG1-213ENST00000540725 CENPPQ6IPU0 288 aa15.32■□□□□ 0.04
SNHG1-213ENST00000540725 TMC8Q8IU68 726 aa15.32■□□□□ 0.04
SNHG1-213ENST00000540725 LRRC3Q9BY71 257 aa15.32■□□□□ 0.04
SNHG1-213ENST00000540725 GPR88Q9GZN0 384 aa15.32■□□□□ 0.04
SNHG1-213ENST00000540725 TRPV5Q9NQA5 729 aa15.32■□□□□ 0.04
SNHG1-213ENST00000540725 PCDHGA2Q9Y5H1 932 aa15.32■□□□□ 0.04
SNHG1-213ENST00000540725 A0A1W2PRU2 124 aa15.31■□□□□ 0.04
SNHG1-213ENST00000540725 VPS37CA5D8V6 355 aaPredicted RBP15.31■□□□□ 0.04
SNHG1-213ENST00000540725 TISP43B9A030 160 aa15.31■□□□□ 0.04
SNHG1-213ENST00000540725 PAX3P23760 479 aa15.31■□□□□ 0.04
SNHG1-213ENST00000540725 ALDH1A3P47895 512 aa15.31■□□□□ 0.04
SNHG1-213ENST00000540725 ACOT2P49753 483 aa15.31■□□□□ 0.04
SNHG1-213ENST00000540725 ZC2HC1CQ53FD0 456 aaPredicted RBP15.31■□□□□ 0.04
SNHG1-213ENST00000540725 ARMCX5Q6P1M9 558 aa15.31■□□□□ 0.04
SNHG1-213ENST00000540725 ERMP1Q7Z2K6 904 aa15.31■□□□□ 0.04
SNHG1-213ENST00000540725 MFSD6LQ8IWD5 586 aa15.31■□□□□ 0.04
SNHG1-213ENST00000540725 ZNF687Q8N1G0 1237 aa15.31■□□□□ 0.04
SNHG1-213ENST00000540725 DCLK2Q8N568 766 aa15.31■□□□□ 0.04
SNHG1-213ENST00000540725 TTC9BQ8N6N2 239 aa15.31■□□□□ 0.04
SNHG1-213ENST00000540725 ATAD1Q8NBU5 361 aa15.31■□□□□ 0.04
SNHG1-213ENST00000540725 BORCS6Q96GS4 357 aa15.31■□□□□ 0.04
SNHG1-213ENST00000540725 TMEM209Q96SK2 561 aa15.31■□□□□ 0.04
SNHG1-213ENST00000540725 CCSER1Q9C0I3 900 aa15.31■□□□□ 0.04
SNHG1-213ENST00000540725 PRMT8Q9NR22 394 aaPredicted RBP15.31■□□□□ 0.04
SNHG1-213ENST00000540725 SLC27A5Q9Y2P5 690 aa15.31■□□□□ 0.04
SNHG1-213ENST00000540725 DERAQ9Y315 318 aa15.31■□□□□ 0.04
SNHG1-213ENST00000540725 PIAS3Q9Y6X2 628 aa15.31■□□□□ 0.04
SNHG1-213ENST00000540725 ANO9A1A5B4 782 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 HEPACAM2A8MVW5 462 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 PIRO00625 290 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 ZNF263O14978 683 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 DDIT3P35638 169 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 MTAPQ13126 283 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 ADALQ6DHV7 355 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 SLFN12LQ6IEE8 588 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 TSSK4Q6SA08 328 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 USP49Q70CQ1 688 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 KRI1Q8N9T8 703 aaKnown RBP15.3■□□□□ 0.04
SNHG1-213ENST00000540725 ZBTB44Q8NCP5 570 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 ATRIPQ8WXE1 791 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 FAM3CQ92520 227 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 NELL1Q92832 810 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 E2F7Q96AV8 911 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 RSPRY1Q96DX4 576 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 EPSTI1Q96J88 318 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 CHRDQ9H2X0 955 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 ST6GALNAC4Q9H4F1 302 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 ASB7Q9H672 318 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 ZSCAN32Q9NX65 697 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 AGO2Q9UKV8 859 aaKnown RBP15.3■□□□□ 0.04
SNHG1-213ENST00000540725 ASB3Q9Y575 518 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 STYXL1Q9Y6J8 313 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 DNAH14Q0VDD8 3507 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 OBSL1O75147 1896 aa15.3■□□□□ 0.04
SNHG1-213ENST00000540725 SOAT2O75908 522 aa15.29■□□□□ 0.04
SNHG1-213ENST00000540725 CYP11A1P05108 521 aa15.29■□□□□ 0.04
SNHG1-213ENST00000540725 STXBP5Q5T5C0 1151 aa15.29■□□□□ 0.04
SNHG1-213ENST00000540725 RALGAPA1Q6GYQ0 2036 aa15.29■□□□□ 0.04
SNHG1-213ENST00000540725 DYMQ7RTS9 669 aa15.29■□□□□ 0.04
SNHG1-213ENST00000540725 SFR1Q86XK3 245 aa15.29■□□□□ 0.04
SNHG1-213ENST00000540725 OR10T2Q8NGX3 314 aa15.29■□□□□ 0.04
SNHG1-213ENST00000540725 PSMG2Q969U7 264 aa15.29■□□□□ 0.04
SNHG1-213ENST00000540725 RMDN1Q96DB5 314 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms