RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 ANO9A1A5B4 782 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 PIRO00625 290 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 ADAM12O43184 909 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 HUS1O60921 280 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 KIF20AO95235 890 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 F13A1P00488 732 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 MYBP10242 640 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 TNFSF9P41273 254 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 ACOT2P49753 483 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 ASIC1P78348 528 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 NFE2Q16621 373 aaPredicted RBP11.22□□□□□ -0.61
CDCA3-208ENST00000540683 ZC2HC1CQ53FD0 456 aaPredicted RBP11.22□□□□□ -0.61
CDCA3-208ENST00000540683 ARHGAP15Q53QZ3 475 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 ZC3H14Q6PJT7 736 aaKnown RBP11.22□□□□□ -0.61
CDCA3-208ENST00000540683 BRSK2Q8IWQ3 736 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 GPD1LQ8N335 351 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 LRRC52Q8N7C0 313 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 PDILTQ8N807 584 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 SPPL2BQ8TCT7 592 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 DEPDC1BQ8WUY9 529 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 DNASE1L2Q92874 299 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 ELSPBP1Q96BH3 223 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 DNAJC19Q96DA6 116 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 MSANTD3Q96H12 275 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 ANKRD36BP1Q96IX9 119 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 CORO1BQ9BR76 489 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 STRA6Q9BX79 667 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 OSBPL6Q9BZF3 934 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 CXCL16Q9H2A7 254 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 SEMA4AQ9H3S1 761 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 ZFP14Q9HCL3 533 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 ARHGEF3Q9NR81 526 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 KBTBD4Q9NVX7 518 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 RBAKQ9NYW8 714 aaPredicted RBP11.22□□□□□ -0.61
CDCA3-208ENST00000540683 DNMT3BQ9UBC3 853 aaKnown RBP11.22□□□□□ -0.61
CDCA3-208ENST00000540683 MYH15Q9Y2K3 1946 aa11.22□□□□□ -0.61
CDCA3-208ENST00000540683 DOCK8Q8NF50 2099 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 KMT2EQ8IZD2 1858 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 ZNF233A6NK53 670 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 KPNA7A9QM74 516 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 ANKRD63C9JTQ0 380 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 MAN2B1O00754 1011 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 CYB561D2O14569 222 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 N4BP1O75113 896 aaKnown RBP11.21□□□□□ -0.61
CDCA3-208ENST00000540683 TNNC2P02585 160 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 CFHP08603 1231 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 NFICP08651 508 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 TMEM191BP0C7N4 346 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 RBP5P82980 135 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 MYL7Q01449 175 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 TWF1Q12792 350 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 PPP2R5DQ14738 602 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 MAPRE1Q15691 268 aaKnown RBP11.21□□□□□ -0.61
CDCA3-208ENST00000540683 FAM173BQ6P4H8 233 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 USP49Q70CQ1 688 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 NPAS3Q8IXF0 933 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 IRF7Q92985 503 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 FAM213AQ9BRX8 229 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 IER2Q9BTL4 223 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 TRIM9Q9C026 710 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 HAPLN2Q9GZV7 340 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 SLITRK6Q9H5Y7 841 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 TRPV5Q9NQA5 729 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 TBC1D7Q9P0N9 293 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 SIT1Q9Y3P8 196 aa11.21□□□□□ -0.61
CDCA3-208ENST00000540683 SOBPA7XYQ1 873 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 GLULP15104 373 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 TRIM21P19474 475 aaKnown RBP11.2□□□□□ -0.62
CDCA3-208ENST00000540683 PCSK1P29120 753 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 LHX1P48742 406 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 MRE11P49959 708 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 EPHA5P54756 1037 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 VCPP55072 806 aaKnown RBP11.2□□□□□ -0.62
CDCA3-208ENST00000540683 STARD6P59095 220 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 KRT85P78386 507 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 TFAMQ00059 246 aaKnown RBP11.2□□□□□ -0.62
CDCA3-208ENST00000540683 SPAG1Q07617 926 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 PSMD2Q13200 908 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 BECN1Q14457 450 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 DUOXA2Q1HG44 320 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 FAM26FQ5R3K3 315 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 SLC39A4Q6P5W5 647 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 UNC13DQ70J99 1090 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 DPH6Q7L8W6 267 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 YAF2Q8IY57 180 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 CCDC105Q8IYK2 499 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 GPR152Q8TDT2 470 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 SMARCD2Q92925 531 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 EXOC4Q96A65 974 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 DHX58Q96C10 678 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 FNBP1Q96RU3 617 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 C7orf25Q9BPX7 421 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 TRMT61BQ9BVS5 477 aaKnown RBP11.2□□□□□ -0.62
CDCA3-208ENST00000540683 BCO2Q9BYV7 579 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 PANK2Q9BZ23 570 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 DNAI2Q9GZS0 605 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 SCAND2PQ9GZW5 306 aaPredicted RBP11.2□□□□□ -0.62
CDCA3-208ENST00000540683 TBC1D17Q9HA65 648 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 EHD2Q9NZN4 543 aa11.2□□□□□ -0.62
CDCA3-208ENST00000540683 UXTQ9UBK9 157 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms