RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 GLTPD2A6NH11 291 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 SCP2P22307 547 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 RFC1P35251 1148 aaPredicted RBP10.56□□□□□ -0.72
TRAF1-202ENST00000540010 SNRPFP62306 86 aaKnown RBP10.56□□□□□ -0.72
TRAF1-202ENST00000540010 ASPHQ12797 758 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 GRAMD1BQ3KR37 738 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 EPC2Q52LR7 807 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 MCUQ8NE86 351 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 ZFP69BQ9UJL9 534 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 HEY1Q9Y5J3 304 aa10.56□□□□□ -0.72
TRAF1-202ENST00000540010 A6NJR5 290 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 DCTN3O75935 186 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 PDIA2Q13087 525 aaKnown RBP10.55□□□□□ -0.72
TRAF1-202ENST00000540010 IZUMO3Q5VZ72 239 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 RAPH1Q70E73 1250 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 JAMLQ86YT9 394 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 FBXO16Q8IX29 292 aaPredicted RBP10.55□□□□□ -0.72
TRAF1-202ENST00000540010 C4orf33Q8N1A6 199 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 DNAAF3Q8N9W5 541 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 PIP4K2CQ8TBX8 421 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 SPIRE2Q8WWL2 714 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 BSNDQ8WZ55 320 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 NUDCD1Q96RS6 583 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 ISCUQ9H1K1 167 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 SMYD3Q9H7B4 428 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 SLC40A1Q9NP59 571 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 TMEM51Q9NW97 253 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 RAB21Q9UL25 225 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 USP20Q9Y2K6 914 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 CLGNO14967 610 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 TJP3O95049 919 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 TXNP10599 105 aaKnown RBP10.55□□□□□ -0.72
TRAF1-202ENST00000540010 PSMA2P25787 234 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 ZNF662Q6ZS27 426 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 MAP4K3Q8IVH8 894 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 GPD1LQ8N335 351 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 CCHCR1Q8TD31 782 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 PPWD1Q96BP3 646 aaKnown RBP10.55□□□□□ -0.72
TRAF1-202ENST00000540010 TSC22D3Q99576 134 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 MSTO1Q9BUK6 570 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 BRCA1P38398 1863 aaKnown RBP10.55□□□□□ -0.72
TRAF1-202ENST00000540010 MAP3K7O43318 606 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 ABCD1P33897 745 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 EPHB1P54762 984 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 PPP3CAQ08209 521 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 DHX34Q14147 1143 aaKnown RBP10.55□□□□□ -0.72
TRAF1-202ENST00000540010 DBN1Q16643 649 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 MMEL1Q495T6 779 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 KRT39Q6A163 491 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 PPM1NQ8N819 430 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 DTX3LQ8TDB6 740 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 DDX27Q96GQ7 796 aaKnown RBP10.55□□□□□ -0.72
TRAF1-202ENST00000540010 POP1Q99575 1024 aaKnown RBP10.55□□□□□ -0.72
TRAF1-202ENST00000540010 ERP44Q9BS26 406 aa10.55□□□□□ -0.72
TRAF1-202ENST00000540010 F5H423 210 aaPredicted RBP10.54□□□□□ -0.72
TRAF1-202ENST00000540010 F8VZ95 297 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 GPC4O75487 556 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 SEPT6Q14141 434 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 SPATA21Q7Z572 469 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 ANKMY2Q8IV38 441 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 ZSWIM2Q8NEG5 633 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 FAM167AQ96KS9 214 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 OSBPL1AQ9BXW6 950 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 SLC13A1Q9BZW2 595 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 MROH8Q9H579 483 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 TXNRD2Q9NNW7 524 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 PHIPQ8WWQ0 1821 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 TGFB3P10600 412 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 Q3C1V9 767 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 MAP3K21Q5TCX8 1036 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 KCNV1Q6PIU1 500 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 METTL7BQ6UX53 244 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 IRF2BP2Q7Z5L9 587 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 DPP9Q86TI2 863 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 RNF169Q8NCN4 708 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 CCL15-CCL14A0A0B4J2E2 113 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 TMEM120BA0PK00 339 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 ENO4A6NNW6 628 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 COPEO14579 308 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 ZBED1O96006 694 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 GSTA1P08263 222 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 GSTA2P09210 222 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 COMTP21964 271 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 ELF1P32519 619 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 ICAM3P32942 547 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 HSPA9P38646 679 aaKnown RBP10.54□□□□□ -0.72
TRAF1-202ENST00000540010 ACOT2P49753 483 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 TTLL4Q14679 1199 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 CCL15Q16663 113 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 TRPM8Q7Z2W7 1104 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 GPRC5AQ8NFJ5 357 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 NLRP4Q96MN2 994 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 ADPGKQ9BRR6 497 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 MAF1Q9H063 256 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 ST6GALNAC4Q9H4F1 302 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 RBPJLQ9UBG7 517 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 AJAP1Q9UKB5 411 aaPredicted RBP10.54□□□□□ -0.72
TRAF1-202ENST00000540010 AGO2Q9UKV8 859 aaKnown RBP10.54□□□□□ -0.72
TRAF1-202ENST00000540010 PDE2AO00408 941 aaPredicted RBP10.54□□□□□ -0.72
TRAF1-202ENST00000540010 GRIN3BO60391 1043 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms