RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 CES5AQ6NT32 575 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 PDXDC1Q6P996 788 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 TRAPPC11Q7Z392 1133 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 LRRTM3Q86VH5 581 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 NT5DC4Q86YG4 428 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 RNF135Q8IUD6 432 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 GUF1Q8N442 669 aaKnown RBP11.55□□□□□ -0.56
HMGA2-209ENST00000539662 TTC9BQ8N6N2 239 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 APPL2Q8NEU8 664 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 CMASQ8NFW8 434 aaPredicted RBP11.55□□□□□ -0.56
HMGA2-209ENST00000539662 ZNF461Q8TAF7 563 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 SMG7Q92540 1137 aaKnown RBP11.55□□□□□ -0.56
HMGA2-209ENST00000539662 CGRRF1Q99675 332 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 SMOC2Q9H3U7 446 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 PLEKHA4Q9H4M7 779 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 PRKAG3Q9UGI9 489 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 L1RE1Q9UN81 338 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 TRAF3IP3Q9Y228 551 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 FAM50BQ9Y247 325 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 NME7Q9Y5B8 376 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 DOCK8Q8NF50 2099 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 H7C4K7 107 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 BIN1O00499 593 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 LRRN2O75325 713 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 SOAT2O75908 522 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 CYP11A1P05108 521 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 ODC1P11926 461 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 TNNI1P19237 187 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 MTHFRP42898 656 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 ADCY1Q08828 1119 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 CAMK4Q16566 473 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 PPM1LQ5SGD2 360 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 ZNF658Q5TYW1 1059 aaPredicted RBP11.54□□□□□ -0.56
HMGA2-209ENST00000539662 CEP135Q66GS9 1140 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 GRASPQ7Z6J2 395 aaPredicted RBP11.54□□□□□ -0.56
HMGA2-209ENST00000539662 WDR49Q8IV35 697 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 SLC9A9Q8IVB4 645 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 PDCL2Q8N4E4 241 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 PARD3BQ8TEW8 1205 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 HDAC7Q8WUI4 952 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 CACTINQ8WUQ7 758 aaKnown RBP11.54□□□□□ -0.56
HMGA2-209ENST00000539662 SMARCE1Q969G3 411 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 IPO9Q96P70 1041 aaKnown RBP11.54□□□□□ -0.56
HMGA2-209ENST00000539662 MYADMQ96S97 322 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 PRKD2Q9BZL6 878 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 CYP4F11Q9HBI6 524 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 KIAA1586Q9HCI6 787 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 TMLHEQ9NVH6 421 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 CGNQ9P2M7 1197 aaKnown RBP11.54□□□□□ -0.56
HMGA2-209ENST00000539662 MUTYHQ9UIF7 546 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 ITGA11Q9UKX5 1188 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 SLC27A5Q9Y2P5 690 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 MYO10Q9HD67 2058 aa11.54□□□□□ -0.56
HMGA2-209ENST00000539662 KINO60870 393 aaKnown RBP11.53□□□□□ -0.56
HMGA2-209ENST00000539662 VNN1O95497 513 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 C1RP00736 705 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 TRIM49P0CI25 452 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 TRIM49CP0CI26 452 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 CPB1P15086 417 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 ATF2P15336 505 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 NR2F2P24468 414 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 ACAT1P24752 427 aaKnown RBP11.53□□□□□ -0.56
HMGA2-209ENST00000539662 MYL6P60660 151 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 UBE2HP62256 183 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 RBP5P82980 135 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 DUOXA2Q1HG44 320 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 SOWAHAQ2M3V2 549 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 SV2CQ496J9 727 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 TDRD10Q5VZ19 366 aaKnown RBP11.53□□□□□ -0.56
HMGA2-209ENST00000539662 ANKRD40Q6AI12 368 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 C15orf39Q6ZRI6 1047 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 USP37Q86T82 979 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 ADSSL1Q8N142 457 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 ATAD1Q8NBU5 361 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 TMEM174Q8WUU8 243 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 CCDC47Q96A33 483 aaKnown RBP11.53□□□□□ -0.56
HMGA2-209ENST00000539662 HPDLQ96IR7 371 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 ANKRD36BP1Q96IX9 119 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 RIPOR3Q96MK2 946 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 GSDMAQ96QA5 445 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 FNBP1Q96RU3 617 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 LPIN3Q9BQK8 851 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 XYLT2Q9H1B5 865 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 WDR6Q9NNW5 1121 aaKnown RBP11.53□□□□□ -0.56
HMGA2-209ENST00000539662 C11orf16Q9NQ32 467 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.53□□□□□ -0.56
HMGA2-209ENST00000539662 LMBRD1Q9NUN5 540 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 ZDHHC7Q9NXF8 308 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 DNMT3BQ9UBC3 853 aaKnown RBP11.53□□□□□ -0.56
HMGA2-209ENST00000539662 POLIQ9UNA4 740 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 SNX9Q9Y5X1 595 aa11.53□□□□□ -0.56
HMGA2-209ENST00000539662 MTMR11A4FU01 709 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 PPP1R3GB7ZBB8 358 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 CALUO43852 315 aaPredicted RBP11.52□□□□□ -0.57
HMGA2-209ENST00000539662 SMC2O95347 1197 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 TNNC2P02585 160 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 C4BPAP04003 597 aaKnown RBP11.52□□□□□ -0.57
HMGA2-209ENST00000539662 ASGR2P07307 311 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 LMO2P25791 158 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 CLDN10P78369 228 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms