RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 C7orf61Q8IZ16 206 aa11.4□□□□□ -0.58
LEMD3-202ENST00000539442 ELMO3Q96BJ8 720 aa11.4□□□□□ -0.58
LEMD3-202ENST00000539442 CCDC42Q96M95 316 aa11.4□□□□□ -0.58
LEMD3-202ENST00000539442 CASD1Q96PB1 797 aa11.4□□□□□ -0.58
LEMD3-202ENST00000539442 CHP1Q99653 195 aa11.4□□□□□ -0.58
LEMD3-202ENST00000539442 NHEJ1Q9H9Q4 299 aaPredicted RBP11.4□□□□□ -0.58
LEMD3-202ENST00000539442 CISHQ9NSE2 258 aa11.4□□□□□ -0.58
LEMD3-202ENST00000539442 ARHGAP20Q9P2F6 1191 aa11.4□□□□□ -0.58
LEMD3-202ENST00000539442 NXF1Q9UBU9 619 aaKnown RBP11.4□□□□□ -0.58
LEMD3-202ENST00000539442 LTBP2Q14767 1821 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 TET1Q8NFU7 2136 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 SOWAHDA6NJG2 315 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 TMEM189-UBE2V1I3L0A0 370 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 PNMA6AP0CW24 399 aaPredicted RBP11.39□□□□□ -0.59
LEMD3-202ENST00000539442 KRT5P13647 590 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 USP8P40818 1118 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 PDE6CP51160 858 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 CLCNKBP51801 687 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 TTC3P53804 2025 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 LILRA4P59901 499 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 ARID5AQ03989 594 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 RNASELQ05823 741 aaKnown RBP11.39□□□□□ -0.59
LEMD3-202ENST00000539442 INCA1Q0VD86 236 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 UPP1Q16831 310 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 COL13A1Q5TAT6 717 aaPredicted RBP11.39□□□□□ -0.59
LEMD3-202ENST00000539442 PSRC1Q6PGN9 363 aaPredicted RBP11.39□□□□□ -0.59
LEMD3-202ENST00000539442 SCARA5Q6ZMJ2 495 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.39□□□□□ -0.59
LEMD3-202ENST00000539442 DPH6Q7L8W6 267 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 MICAL3Q7RTP6 2002 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 VPS36Q86VN1 386 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 ZSCAN30Q86W11 494 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 LRRC43Q8N309 656 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 TMEM130Q8N3G9 435 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 TOP6BLQ8N6T0 577 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 EPS8L1Q8TE68 723 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 BADQ92934 168 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 TOP1MTQ969P6 601 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 FAM193BQ96PV7 902 aaPredicted RBP11.39□□□□□ -0.59
LEMD3-202ENST00000539442 DEF6Q9H4E7 631 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 HAUS4Q9H6D7 363 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 SMYD3Q9H7B4 428 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 TBC1D13Q9NVG8 400 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 POLIQ9UNA4 740 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 PCDHB4Q9Y5E5 795 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 SNX9Q9Y5X1 595 aa11.39□□□□□ -0.59
LEMD3-202ENST00000539442 TRIP11Q15643 1979 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 ARHGEF37A1IGU5 675 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 CARNS1A5YM72 827 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 CASTOR2A6NHX0 329 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 EIF3CLB5ME19 914 aaKnown RBP11.38□□□□□ -0.59
LEMD3-202ENST00000539442 SPTLC1O15269 473 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 CYP26A1O43174 497 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 CILPO75339 1184 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 TACC1O75410 805 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 NDUFA10O95299 355 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 IPO7O95373 1038 aaKnown RBP11.38□□□□□ -0.59
LEMD3-202ENST00000539442 FGBP02675 491 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 PAEPP09466 180 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 WEE2P0C1S8 567 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 CLCN1P35523 988 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 EIF4A3P38919 411 aaKnown RBP11.38□□□□□ -0.59
LEMD3-202ENST00000539442 AARSP49588 968 aaKnown RBP eCLIP11.38□□□□□ -0.59
LEMD3-202ENST00000539442 ZNF132P52740 706 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 WDR5P61964 334 aaKnown RBP11.38□□□□□ -0.59
LEMD3-202ENST00000539442 PTK2Q05397 1052 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 BMS1Q14692 1282 aaKnown RBP11.38□□□□□ -0.59
LEMD3-202ENST00000539442 ASTE1Q2TB18 679 aaPredicted RBP11.38□□□□□ -0.59
LEMD3-202ENST00000539442 DCLRE1AQ6PJP8 1040 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 TMEM270Q6UE05 265 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 RAD9BQ6WBX8 426 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 LIMS2Q7Z4I7 341 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 ZNF677Q86XU0 584 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 COLGALT2Q8IYK4 626 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 RBBP8NLQ8NC74 664 aaPredicted RBP11.38□□□□□ -0.59
LEMD3-202ENST00000539442 SPATA18Q8TC71 538 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 MMS19Q96T76 1030 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 EIF3CQ99613 913 aaKnown RBP11.38□□□□□ -0.59
LEMD3-202ENST00000539442 TMEM175Q9BSA9 504 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 SYT11Q9BT88 431 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 DNAI2Q9GZS0 605 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 PYCARDQ9ULZ3 195 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 BARX2Q9UMQ3 279 aaPredicted RBP11.38□□□□□ -0.59
LEMD3-202ENST00000539442 EPN1Q9Y6I3 576 aaPredicted RBP11.38□□□□□ -0.59
LEMD3-202ENST00000539442 ALPK3Q96L96 1907 aa11.38□□□□□ -0.59
LEMD3-202ENST00000539442 TBKBP1A7MCY6 615 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 CCP110O43303 1012 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 AKR1B10O60218 316 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 HUS1O60921 280 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 DGKIO75912 1065 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 B3GAT3O94766 335 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 DDHD2O94830 711 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 LCA5LO95447 670 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 PLEKP08567 350 aaPredicted RBP11.37□□□□□ -0.59
LEMD3-202ENST00000539442 ACRP10323 421 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 CYP11B1P15538 503 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 CD58P19256 250 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 KIF11P52732 1056 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 KRT83P78385 493 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 SLC18A3Q16572 532 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms