RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 GSTCDQ8NEC7 633 aa16.47■□□□□ 0.23
VAMP1-207ENST00000539047 APPL2Q8NEU8 664 aa16.47■□□□□ 0.23
VAMP1-207ENST00000539047 KIAA1524Q8TCG1 905 aa16.47■□□□□ 0.23
VAMP1-207ENST00000539047 EIF3CQ99613 913 aaKnown RBP16.47■□□□□ 0.23
VAMP1-207ENST00000539047 SNX25Q9H3E2 840 aa16.47■□□□□ 0.23
VAMP1-207ENST00000539047 SMYD3Q9H7B4 428 aa16.47■□□□□ 0.23
VAMP1-207ENST00000539047 GDAP2Q9NXN4 497 aa16.47■□□□□ 0.23
VAMP1-207ENST00000539047 PUF60Q9UHX1 559 aaKnown RBP16.47■□□□□ 0.23
VAMP1-207ENST00000539047 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.46■□□□□ 0.23
VAMP1-207ENST00000539047 MED7O43513 233 aa16.46■□□□□ 0.23
VAMP1-207ENST00000539047 PLEKP08567 350 aaPredicted RBP16.46■□□□□ 0.23
VAMP1-207ENST00000539047 WEE2P0C1S8 567 aa16.46■□□□□ 0.23
VAMP1-207ENST00000539047 ODC1P11926 461 aa16.46■□□□□ 0.23
VAMP1-207ENST00000539047 GNA15P30679 374 aa16.46■□□□□ 0.23
VAMP1-207ENST00000539047 CLCNKBP51801 687 aa16.46■□□□□ 0.23
VAMP1-207ENST00000539047 C1QBPQ07021 282 aaKnown RBP16.46■□□□□ 0.23
VAMP1-207ENST00000539047 SLC18A3Q16572 532 aa16.46■□□□□ 0.23
VAMP1-207ENST00000539047 C10orf76Q5T2E6 689 aa16.46■□□□□ 0.23
VAMP1-207ENST00000539047 PPP1R2P3Q6NXS1 205 aa16.46■□□□□ 0.23
VAMP1-207ENST00000539047 PSRC1Q6PGN9 363 aaPredicted RBP16.46■□□□□ 0.23
VAMP1-207ENST00000539047 DSTYKQ6XUX3 929 aa16.46■□□□□ 0.23
VAMP1-207ENST00000539047 DPH6Q7L8W6 267 aa16.46■□□□□ 0.23
VAMP1-207ENST00000539047 TOP6BLQ8N6T0 577 aa16.46■□□□□ 0.23
VAMP1-207ENST00000539047 AGPAT1Q99943 283 aa16.46■□□□□ 0.23
VAMP1-207ENST00000539047 LBHD1Q9BQE6 289 aaPredicted RBP16.46■□□□□ 0.23
VAMP1-207ENST00000539047 MTIF3Q9H2K0 278 aaKnown RBP16.46■□□□□ 0.23
VAMP1-207ENST00000539047 TBC1D13Q9NVG8 400 aa16.46■□□□□ 0.23
VAMP1-207ENST00000539047 CNTN6Q9UQ52 1028 aa16.46■□□□□ 0.23
VAMP1-207ENST00000539047 CEP83Q9Y592 693 aa16.46■□□□□ 0.23
VAMP1-207ENST00000539047 TSC2P49815 1807 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 CARNS1A5YM72 827 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 TBKBP1A7MCY6 615 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 PPEF2O14830 753 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 THAP12O43422 761 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 PAEPP09466 180 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 CYP11B1P15538 503 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 ACO1P21399 889 aaKnown RBP16.45■□□□□ 0.22
VAMP1-207ENST00000539047 RAP1GAPP47736 663 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 LILRA4P59901 499 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 INCA1Q0VD86 236 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 MTF1Q14872 753 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 NAB2Q15742 525 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 UPP1Q16831 310 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 TRIM72Q6ZMU5 477 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 TOGARAM2Q6ZUX3 1019 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 METTL23Q86XA0 190 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 TMEM86AQ8N2M4 240 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 EPS8L1Q8TE68 723 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 DESI2Q9BSY9 194 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 TSGA10Q9BZW7 698 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 MIOSQ9NXC5 875 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 DSEQ9UL01 958 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 BARX2Q9UMQ3 279 aaPredicted RBP16.45■□□□□ 0.22
VAMP1-207ENST00000539047 PPP2R2CQ9Y2T4 447 aa16.45■□□□□ 0.22
VAMP1-207ENST00000539047 CYB561D2O14569 222 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 TRAPPC3O43617 180 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 TACC1O75410 805 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 B3GAT3O94766 335 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 UPP2O95045 317 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 FAM163BP0C2L3 166 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 CD19P15391 556 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 CLCN1P35523 988 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 OR1G1P47890 313 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 CDR2Q01850 454 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 ARHGAP29Q52LW3 1261 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 DCLRE1AQ6PJP8 1040 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 ZNF571Q7Z3V5 609 aaPredicted RBP16.44■□□□□ 0.22
VAMP1-207ENST00000539047 SLC47A2Q86VL8 602 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 UNC93AQ86WB7 457 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 ADGRF2Q8IZF7 708 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 UBR7Q8N806 425 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 OR6B3Q8NGW1 331 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 NT5C1AQ9BXI3 368 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 SPTLC3Q9NUV7 552 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 ADAMTS1Q9UHI8 967 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 KIAA1257Q9ULG3 409 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 ADGRG1Q9Y653 693 aa16.44■□□□□ 0.22
VAMP1-207ENST00000539047 ZBBXA8MT70 800 aa16.43■□□□□ 0.22
VAMP1-207ENST00000539047 RBAK-RBAKDNI3L0D1 243 aa16.43■□□□□ 0.22
VAMP1-207ENST00000539047 CILPO75339 1184 aa16.43■□□□□ 0.22
VAMP1-207ENST00000539047 FGBP02675 491 aa16.43■□□□□ 0.22
VAMP1-207ENST00000539047 AFF1P51825 1210 aaKnown RBP16.43■□□□□ 0.22
VAMP1-207ENST00000539047 ZNF132P52740 706 aa16.43■□□□□ 0.22
VAMP1-207ENST00000539047 GFPT1Q06210 699 aaPredicted RBP16.43■□□□□ 0.22
VAMP1-207ENST00000539047 DSC1Q08554 894 aa16.43■□□□□ 0.22
VAMP1-207ENST00000539047 STILQ15468 1287 aa16.43■□□□□ 0.22
VAMP1-207ENST00000539047 TCTN1Q2MV58 587 aa16.43■□□□□ 0.22
VAMP1-207ENST00000539047 ZNF394Q53GI3 561 aa16.43■□□□□ 0.22
VAMP1-207ENST00000539047 TAF3Q5VWG9 929 aa16.43■□□□□ 0.22
VAMP1-207ENST00000539047 NOP9Q86U38 636 aaKnown RBP16.43■□□□□ 0.22
VAMP1-207ENST00000539047 GLYCTKQ8IVS8 523 aa16.43■□□□□ 0.22
VAMP1-207ENST00000539047 CCAR2Q8N163 923 aaKnown RBP16.43■□□□□ 0.22
VAMP1-207ENST00000539047 ACRBPQ8NEB7 543 aa16.43■□□□□ 0.22
VAMP1-207ENST00000539047 SPATA18Q8TC71 538 aa16.43■□□□□ 0.22
VAMP1-207ENST00000539047 BADQ92934 168 aa16.43■□□□□ 0.22
VAMP1-207ENST00000539047 TMEM176AQ96HP8 235 aa16.43■□□□□ 0.22
VAMP1-207ENST00000539047 TNIP3Q96KP6 325 aa16.43■□□□□ 0.22
VAMP1-207ENST00000539047 CASD1Q96PB1 797 aa16.43■□□□□ 0.22
VAMP1-207ENST00000539047 TMEM175Q9BSA9 504 aa16.43■□□□□ 0.22
VAMP1-207ENST00000539047 COLEC11Q9BWP8 271 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms