RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 PCMTD2Q9NV79 361 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 ZSCAN32Q9NX65 697 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 WDR35Q9P2L0 1181 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 R3HDM2Q9Y2K5 976 aaKnown RBP10.41□□□□□ -0.74
COL4A6-208ENST00000538570 PRDM15P57071 1507 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-208ENST00000538570 SERPIND1P05546 499 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 SLC9A1P19634 815 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 GRIK1P39086 918 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 KPNB1Q14974 876 aaKnown RBP10.4□□□□□ -0.74
COL4A6-208ENST00000538570 EPHA7Q15375 998 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 CCDC142Q17RM4 750 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 QRICH1Q2TAL8 776 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 AASDHQ4L235 1098 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-208ENST00000538570 TTLL6Q8N841 843 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 RIN2Q8WYP3 895 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-208ENST00000538570 ZNF668Q96K58 619 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-208ENST00000538570 XPO6Q96QU8 1125 aaKnown RBP10.4□□□□□ -0.74
COL4A6-208ENST00000538570 STK33Q9BYT3 514 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 MROH7-TTC4A0A0A0MT08 1334 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 MTF1Q14872 753 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 SYCP2LQ5T4T6 812 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 BBS7Q8IWZ6 715 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 GALNT4Q8N4A0 578 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 MARCH10Q8NA82 808 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-208ENST00000538570 WRNIP1Q96S55 665 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 C17orf80Q9BSJ5 609 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 DCP1AQ9NPI6 582 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-208ENST00000538570 RAB6BQ9NRW1 208 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 HSPBP1Q9NZL4 362 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 APEX2Q9UBZ4 518 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 FBXO9Q9UK97 447 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-208ENST00000538570 M0R3G1 203 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 AIM2O14862 343 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 NDUFS3O75489 264 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 TCF3P15923 654 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 PRDX5P30044 214 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 COPB2P35606 906 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 CACNB2Q08289 660 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-208ENST00000538570 PTK7Q13308 1070 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 STILQ15468 1287 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 LMBRD2Q68DH5 695 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-208ENST00000538570 CLEC4GQ6UXB4 293 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 SPATA2LQ8IUW3 424 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-208ENST00000538570 ATPAF2Q8N5M1 289 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 APPL2Q8NEU8 664 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 CALML6Q8TD86 181 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 PRPF18Q99633 342 aaKnown RBP10.4□□□□□ -0.74
COL4A6-208ENST00000538570 KLHL31Q9H511 634 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 MARCOQ9UEW3 520 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-208ENST00000538570 GOLGA8TH3BQL2 631 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 LZTS3O60299 673 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-208ENST00000538570 LRPAP1P30533 357 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 PIGHQ14442 188 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-208ENST00000538570 ZCWPW2Q504Y3 356 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 MEI1Q5TIA1 1274 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 TTC39BQ5VTQ0 682 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-208ENST00000538570 C4orf33Q8N1A6 199 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 PPP1R2P1Q96PQ5 205 aa10.4□□□□□ -0.74
COL4A6-208ENST00000538570 TDRD3Q9H7E2 651 aaKnown RBP10.4□□□□□ -0.74
COL4A6-208ENST00000538570 ZC3H4Q9UPT8 1303 aaKnown RBP10.4□□□□□ -0.75
COL4A6-208ENST00000538570 GUCA1CO95843 209 aa10.4□□□□□ -0.75
COL4A6-208ENST00000538570 CYBBP04839 570 aa10.4□□□□□ -0.75
COL4A6-208ENST00000538570 ATP6V1B1P15313 513 aa10.4□□□□□ -0.75
COL4A6-208ENST00000538570 TRIP10Q15642 601 aa10.4□□□□□ -0.75
COL4A6-208ENST00000538570 ALX1Q15699 326 aa10.4□□□□□ -0.75
COL4A6-208ENST00000538570 WLSQ5T9L3 541 aa10.4□□□□□ -0.75
COL4A6-208ENST00000538570 ERP27Q96DN0 273 aa10.4□□□□□ -0.75
COL4A6-208ENST00000538570 EMC3Q9P0I2 261 aa10.4□□□□□ -0.75
COL4A6-208ENST00000538570 SUPT3HB4E1H0 165 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 ASMTLO95671 621 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 RALBP11234 206 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 PAX3P23760 479 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 YWHABP31946 246 aaKnown RBP10.39□□□□□ -0.75
COL4A6-208ENST00000538570 CLK1P49759 484 aaKnown RBP10.39□□□□□ -0.75
COL4A6-208ENST00000538570 GPSM2P81274 684 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 TRIM69Q86WT6 500 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 EFHD2Q96C19 240 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-208ENST00000538570 UBE2OQ9C0C9 1292 aaKnown RBP10.39□□□□□ -0.75
COL4A6-208ENST00000538570 ACAD9Q9H845 621 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-208ENST00000538570 FOXN1O15353 648 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 SPAG6O75602 509 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 YY1P25490 414 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 SETD3Q86TU7 594 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-208ENST00000538570 FAM81AQ8TBF8 368 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 ZFP42Q96MM3 310 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 MMADHCQ9H3L0 296 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-208ENST00000538570 IL1RAPL1Q9NZN1 696 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 CD274Q9NZQ7 290 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 PKP3Q9Y446 797 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 PCDHA10Q9Y5I2 948 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 ITIH6Q6UXX5 1313 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 PPP3CCP48454 512 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 NUDT18Q6ZVK8 323 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 IFNEQ86WN2 208 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 GATAD2AQ86YP4 633 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 C2orf69Q8N8R5 385 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 SLC44A5Q8NCS7 719 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 SHCBP1Q8NEM2 672 aa10.39□□□□□ -0.75
COL4A6-208ENST00000538570 CPA5Q8WXQ8 436 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms