RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 SURF1Q15526 300 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 DNAJC21Q5F1R6 531 aaKnown RBP9.84□□□□□ -0.83
DDB1-211ENST00000538280 TNFAIP8L3Q5GJ75 292 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 LIN9Q5TKA1 542 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 SPOPLQ6IQ16 392 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 KCNV1Q6PIU1 500 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 SYDE1Q6ZW31 735 aaPredicted RBP9.84□□□□□ -0.83
DDB1-211ENST00000538280 CROCCP2Q86T23 111 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 EXOC8Q8IYI6 725 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 RBBP8NLQ8NC74 664 aaPredicted RBP9.84□□□□□ -0.83
DDB1-211ENST00000538280 OR5B17Q8NGF7 314 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 TCP11Q8WWU5 503 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 BBXQ8WY36 941 aaPredicted RBP9.84□□□□□ -0.83
DDB1-211ENST00000538280 CYFIP2Q96F07 1278 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 PGM2Q96G03 612 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 PARK7Q99497 189 aaKnown RBP9.84□□□□□ -0.83
DDB1-211ENST00000538280 GPR20Q99678 358 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 ACO2Q99798 780 aaKnown RBP9.84□□□□□ -0.83
DDB1-211ENST00000538280 TRIM31Q9BZY9 425 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 TSPYL1Q9H0U9 437 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 LRRC4CQ9HCJ2 640 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 WHRNQ9P202 907 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 MTRF1LQ9UGC7 380 aaKnown RBP9.84□□□□□ -0.83
DDB1-211ENST00000538280 RSPH14Q9UHP6 348 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 GGA2Q9UJY4 613 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 NEU2Q9Y3R4 380 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 NUB1Q9Y5A7 615 aa9.84□□□□□ -0.83
DDB1-211ENST00000538280 OGTO15294 1046 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 TP73O15350 636 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 TOM1L1O75674 476 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 ARIH2O95376 493 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 CFHP08603 1231 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 RARGP13631 454 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 IVDP26440 423 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 GNA15P30679 374 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 CDH5P33151 784 aaPredicted RBP9.83□□□□□ -0.84
DDB1-211ENST00000538280 TCF7P36402 384 aaPredicted RBP9.83□□□□□ -0.84
DDB1-211ENST00000538280 CCT5P48643 541 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 GUCY1A3Q02108 690 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 DRP2Q13474 957 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 NCOA4Q13772 614 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 SLMAPQ14BN4 828 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 KRT71Q3SY84 523 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 GADL1Q6ZQY3 521 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 Q7L0L9 218 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 PLPPR4Q7Z2D5 763 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 HOOK3Q86VS8 718 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 SPATS2Q86XZ4 545 aaKnown RBP9.83□□□□□ -0.84
DDB1-211ENST00000538280 KATNAL2Q8IYT4 538 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 SLAIN1Q8ND83 568 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 MYCBPAPQ8TBZ2 947 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 CENPTQ96BT3 561 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 DEFB118Q96PH6 123 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 HERPUD2Q9BSE4 406 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 HTATIP2Q9BUP3 242 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 MRPL4Q9BYD3 311 aaKnown RBP9.83□□□□□ -0.84
DDB1-211ENST00000538280 TRIM7Q9C029 511 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 DCLK3Q9C098 648 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 FAM107BQ9H098 131 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 C2orf40Q9H1Z8 148 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 MRPL47Q9HD33 250 aaKnown RBP9.83□□□□□ -0.84
DDB1-211ENST00000538280 FEZ2Q9UHY8 353 aaPredicted RBP9.83□□□□□ -0.84
DDB1-211ENST00000538280 CPSF3Q9UKF6 684 aaKnown RBP9.83□□□□□ -0.84
DDB1-211ENST00000538280 ATP8A1Q9Y2Q0 1164 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 PCDHB4Q9Y5E5 795 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 SCINQ9Y6U3 715 aa9.83□□□□□ -0.84
DDB1-211ENST00000538280 LAMA2P24043 3122 aaKnown RBP9.82□□□□□ -0.84
DDB1-211ENST00000538280 C5orf60A6NFR6 353 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 TTLL13PA6NNM8 815 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 EBAG9O00559 213 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 CLDN3O15551 220 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 RIPK2O43353 540 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 PEX10O60683 326 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 ECEL1O95672 775 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 LSM8O95777 96 aaKnown RBP9.82□□□□□ -0.84
DDB1-211ENST00000538280 CPP00450 1065 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 SHBGP04278 402 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 HOXC6P09630 235 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 MMP8P22894 467 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 HOXD10P28358 340 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 TNFSF9P41273 254 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 MNX1P50219 401 aaPredicted RBP9.82□□□□□ -0.84
DDB1-211ENST00000538280 PLTPP55058 493 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 TAS2R40P59535 323 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 MAMLD1Q13495 774 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 SGO2Q562F6 1265 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 PPP1R15BQ5SWA1 713 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 CELF3Q5SZQ8 465 aaKnown RBP9.82□□□□□ -0.84
DDB1-211ENST00000538280 DENND2CQ68D51 928 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 TTC19Q6DKK2 380 aaPredicted RBP9.82□□□□□ -0.84
DDB1-211ENST00000538280 CCDC62Q6P9F0 684 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 TMEM270Q6UE05 265 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 NLRP14Q86W24 1093 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 RHOT1Q8IXI2 618 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 GRK7Q8WTQ7 553 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 ZNF473Q8WTR7 871 aaKnown RBP9.82□□□□□ -0.84
DDB1-211ENST00000538280 PRPF31Q8WWY3 499 aaKnown RBP9.82□□□□□ -0.84
DDB1-211ENST00000538280 CPA5Q8WXQ8 436 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 FAXDC2Q96IV6 333 aa9.82□□□□□ -0.84
DDB1-211ENST00000538280 PAWRQ96IZ0 340 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms