RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 CBWD6Q4V339 395 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 VWA3BQ502W6 1294 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 DCAF6Q58WW2 860 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 TCP11X2Q5H9J9 407 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 CBWD3Q5JTY5 395 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 CBWD5Q5RIA9 395 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 FAM102AQ5T9C2 384 aaPredicted RBP7.71□□□□□ -1.18
MSH6-209ENST00000538136 BTBD8Q5XKL5 378 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 HEATR6Q6AI08 1181 aaKnown RBP7.71□□□□□ -1.18
MSH6-209ENST00000538136 CNKSR3Q6P9H4 555 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 TMEM173Q86WV6 379 aaPredicted RBP7.71□□□□□ -1.18
MSH6-209ENST00000538136 EMC1Q8N766 993 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 TAF4BQ92750 862 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 KRT82Q9NSB4 513 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 AGPAT5Q9NUQ2 364 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 PHF24Q9UPV7 400 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 FRMPD4Q14CM0 1322 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 RREB1Q92766 1687 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 BCORQ6W2J9 1755 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 M0R2N6 131 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 PDXKO00764 312 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 XRCC6P12956 609 aaKnown RBP eCLIP7.71□□□□□ -1.182e-10■■□□□ 12.2
MSH6-209ENST00000538136 LMO2P25791 158 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 IRS1P35568 1242 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 TMEM119Q4V9L6 283 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 ERICH1Q86X53 443 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 TDHQ8IZJ6 230 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 LRRC43Q8N309 656 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 USP6NLQ92738 828 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 FBXO32Q969P5 355 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 RAD9AQ99638 391 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 SYT15Q9BQS2 421 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 TSEN34Q9BSV6 310 aaKnown RBP7.71□□□□□ -1.18
MSH6-209ENST00000538136 PBX4Q9BYU1 374 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 TRIM31Q9BZY9 425 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 ZMYND15Q9H091 742 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 NRDE2Q9H7Z3 1164 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 ACACAQ13085 2346 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 LTBP1Q14766 1721 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 FER1L6Q2WGJ9 1857 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 DDHD2O94830 711 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 RHOBTB3O94955 611 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 CD4P01730 458 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 MAPTP10636 758 aaKnown RBP7.7□□□□□ -1.18
MSH6-209ENST00000538136 MBL2P11226 248 aaPredicted RBP7.7□□□□□ -1.18
MSH6-209ENST00000538136 ODC1P11926 461 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 NOVP48745 357 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 GNG11P61952 73 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 RBL2Q08999 1139 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 MTMR3Q13615 1198 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 HSP90AA2PQ14568 343 aaPredicted RBP7.7□□□□□ -1.18
MSH6-209ENST00000538136 MBTPS1Q14703 1052 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 DCAF4L1Q3SXM0 396 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 AGMOQ6ZNB7 445 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 B4GALNT4Q76KP1 1039 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 SCUBE3Q8IX30 993 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 OTUD6BQ8N6M0 293 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 RBBP8NLQ8NC74 664 aaPredicted RBP7.7□□□□□ -1.18
MSH6-209ENST00000538136 CCNYQ8ND76 341 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 HSPH1Q92598 858 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 INTS13Q9NVM9 706 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 TET1Q8NFU7 2136 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 AKR1B15C9JRZ8 316 aaPredicted RBP7.7□□□□□ -1.18
MSH6-209ENST00000538136 URI1O94763 535 aaPredicted RBP7.7□□□□□ -1.18
MSH6-209ENST00000538136 GLUD1P00367 558 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 NCAM1P13591 858 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 GABRR2P28476 465 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 LMAN1P49257 510 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 LRRC63Q05C16 580 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 TIGD5Q53EQ6 642 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 KLHDC9Q8NEP7 349 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 ENGASEQ8NFI3 743 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 TTPALQ9BTX7 342 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 NT5C1AQ9BXI3 368 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 FAM204AQ9H8W3 233 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 MAGEF1Q9HAY2 307 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 KANSL3Q9P2N6 904 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 LAMB2P55268 1798 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 A0A0U1RQF3 1178 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 CCDC172P0C7W6 258 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 ARL2P36404 184 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 CYP24A1Q07973 514 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 TUSC3Q13454 348 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 USP41Q3LFD5 358 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 SGO2Q562F6 1265 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 TMEM240Q5SV17 173 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 CFAP58Q5T655 872 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 GRASPQ7Z6J2 395 aaPredicted RBP7.7□□□□□ -1.18
MSH6-209ENST00000538136 DDX53Q86TM3 631 aaKnown RBP7.7□□□□□ -1.18
MSH6-209ENST00000538136 ZMAT2Q96NC0 199 aaKnown RBP7.7□□□□□ -1.18
MSH6-209ENST00000538136 FAM118BQ9BPY3 351 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 ADAM22Q9P0K1 906 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 RWDD2AQ9UIY3 292 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 ADAM28Q9UKQ2 775 aa7.7□□□□□ -1.18
MSH6-209ENST00000538136 ABHD14A-ACY1A0A1B0GW23 586 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 MYBPHLA2RUH7 354 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 FOXN3O00409 490 aaPredicted RBP7.69□□□□□ -1.18
MSH6-209ENST00000538136 SKIP12755 728 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 BMP6P22004 513 aa7.69□□□□□ -1.18
MSH6-209ENST00000538136 GBP1P32455 592 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms