RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 EPHB6O15197 1021 aa11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 HSPA8P11142 646 aaKnown RBP11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 HOXD11P31277 338 aaPredicted RBP11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 TCF7P36402 384 aaPredicted RBP11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 TRAPPC10P48553 1259 aa11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 NR1H3Q13133 447 aa11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 BCL2A1Q16548 175 aa11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 ZNF423Q2M1K9 1284 aa11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 TNFAIP8L3Q5GJ75 292 aa11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 ANKLE1Q8NAG6 615 aa11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 PYROXD1Q8WU10 500 aa11.46□□□□□ -0.58
CLSTN3-207ENST00000537408 SCN11AQ9UI33 1791 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 TRAF5O00463 557 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 C2CD2LO14523 706 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 CCT8P50990 548 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 NUP107P57740 925 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 SPP2Q13103 211 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 C6orf183Q5T699 404 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 C1orf146Q5VVC0 180 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 FKBP1CQ5VVH2 108 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 ANO5Q75V66 913 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 PALB2Q86YC2 1186 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 TNS4Q8IZW8 715 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 ZNF280CQ8ND82 737 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 GTF3C2Q8WUA4 911 aaPredicted RBP11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 GINM1Q9NU53 330 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 GIT1Q9Y2X7 761 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 AK5Q9Y6K8 562 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 TNKSO95271 1327 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 CYTH3O43739 400 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 DNAJC6O75061 913 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 CNOT3O75175 753 aaKnown RBP11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 ESRRBO95718 433 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 H2AFZP0C0S5 128 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 GTF2H1P32780 548 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 PDAP1Q13442 181 aaKnown RBP11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 ANKRD20A4Q4UJ75 823 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 HGSNATQ68CP4 663 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 H2AFVQ71UI9 128 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 TXNRD3Q86VQ6 643 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 ZNF654Q8IZM8 581 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 TMCO5AQ8N6Q1 288 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 TPCN2Q8NHX9 752 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 CALML4Q96GE6 196 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 PACSIN1Q9BY11 444 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 KANSL2Q9H9L4 492 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 USP29Q9HBJ7 922 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 ATAD3AQ9NVI7 634 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 ACTL7BQ9Y614 415 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 SPDYE16A6NNV3 312 aaPredicted RBP11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 USP17L10C9JJH3 530 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 KIAA0391O15091 583 aaKnown RBP11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 GH1P01241 217 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 EMP3P54852 163 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 GRM2Q14416 872 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 KCTD2Q14681 263 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 ARL6IP4Q66PJ3 421 aaKnown RBP11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 NEPROQ6NW34 567 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 ADAT2Q7Z6V5 191 aaKnown RBP11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 PRICKLE1Q96MT3 831 aaPredicted RBP11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 STRBPQ96SI9 672 aaKnown RBP11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 TMEM39BQ9GZU3 492 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 GPAMQ9HCL2 828 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 C6orf50Q9HD87 102 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 PLK2Q9NYY3 685 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 PRKAG2Q9UGJ0 569 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 TTC7AQ9ULT0 858 aaPredicted RBP11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 SCINQ9Y6U3 715 aa11.45□□□□□ -0.58
CLSTN3-207ENST00000537408 A0A087X0T9 212 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 THAP12O43422 761 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 TPPPO94811 219 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 ALDH2P05091 517 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 FAM228BP0C875 321 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 ZNF12P17014 697 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 ARHGAP4P98171 946 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 SPDYE2Q495Y8 402 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 DEPDC1Q5TB30 811 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 CLNKQ7Z7G1 428 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 SRPK1Q96SB4 655 aaKnown RBP11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 RNF26Q9BY78 433 aaPredicted RBP11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 TPK1Q9H3S4 243 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 FAM217BQ9NTX9 383 aaPredicted RBP11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 MYO5AQ9Y4I1 1855 aaKnown RBP11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 RASA4BC9J798 803 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 ADCY6O43306 1168 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 RASA4O43374 803 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 ZNF862O60290 1169 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 CDH16O75309 829 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 CYP2C9P11712 490 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 POLR2EP19388 210 aaKnown RBP11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 PPP2R5BQ15173 497 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 CDC42EP5Q6NZY7 148 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 DTHD1Q6ZMT9 781 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 RFX8Q6ZV50 586 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 IGDCC4Q8TDY8 1250 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 C7orf43Q8WVR3 580 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 MIPEPQ99797 713 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 HAUS8Q9BT25 410 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 OSBPL8Q9BZF1 889 aa11.44□□□□□ -0.58
CLSTN3-207ENST00000537408 GID8Q9NWU2 228 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms