RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 USP17L3A6NCW0 530 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 USP17L4A6NCW7 530 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 BTBD19C9JJ37 291 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 EML1O00423 815 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 KLF11O14901 512 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 STRNO43815 780 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 SLC37A4O43826 429 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 EDF1O60869 148 aaKnown RBP6.15□□□□□ -1.42
CHD4-206ENST00000536999 LRRN2O75325 713 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 TDP2O95551 362 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 ASMTLO95671 621 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 PENKP01210 267 aaPredicted RBP6.15□□□□□ -1.42
CHD4-206ENST00000536999 MYL4P12829 197 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 DESP17661 470 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 COMTP21964 271 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 MAPK4P31152 587 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 PTPN7P35236 360 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 PTDSS1P48651 473 aaKnown RBP6.15□□□□□ -1.42
CHD4-206ENST00000536999 VAMP7P51809 220 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 IFI35P80217 286 aaPredicted RBP6.15□□□□□ -1.42
CHD4-206ENST00000536999 KRT17Q04695 432 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 CBLBQ13191 982 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 BIRC2Q13490 618 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 CTTNQ14247 550 aaKnown RBP6.15□□□□□ -1.42
CHD4-206ENST00000536999 SLC5A9Q2M3M2 681 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 NAIF1Q69YI7 327 aaPredicted RBP6.15□□□□□ -1.42
CHD4-206ENST00000536999 ACAD10Q6JQN1 1059 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 DPY19L2P1Q6NXN4 242 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 TMEM154Q6P9G4 183 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 RHBDF2Q6PJF5 856 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.15□□□□□ -1.42
CHD4-206ENST00000536999 GSTA5Q7RTV2 222 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 USP17L1Q7RTZ2 530 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 ZNF720Q7Z2F6 126 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 CCDC25Q86WR0 208 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 CATSPER3Q86XQ3 398 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 TMEM126BQ8IUX1 230 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 APOBEC3FQ8IUX4 373 aaKnown RBP6.15□□□□□ -1.42
CHD4-206ENST00000536999 FAM71AQ8IYT1 594 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 ADGRF4Q8IZF3 695 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 OGFOD1Q8N543 542 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 XXYLT1Q8NBI6 393 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 CATSPER1Q8NEC5 780 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 EXD1Q8NHP7 514 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 TMC2Q8TDI7 906 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 ADAMTS19Q8TE59 1207 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 SREK1Q8WXA9 508 aaKnown RBP6.15□□□□□ -1.42
CHD4-206ENST00000536999 GLG1Q92896 1179 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 CD101Q93033 1021 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 PPP2R3CQ969Q6 453 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 ZBTB9Q96C00 473 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 PAWRQ96IZ0 340 aaKnown RBP6.15□□□□□ -1.42
CHD4-206ENST00000536999 UHRF1Q96T88 793 aaPredicted RBP6.15□□□□□ -1.42
CHD4-206ENST00000536999 RIT2Q99578 217 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 TBC1D10AQ9BXI6 508 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 ANO3Q9BYT9 981 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 CELF4Q9BZC1 486 aaKnown RBP6.15□□□□□ -1.42
CHD4-206ENST00000536999 MAF1Q9H063 256 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 UNC93B1Q9H1C4 597 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 NEUROG2Q9H2A3 272 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 EPB41L4BQ9H329 900 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 CDC42EP4Q9H3Q1 356 aaKnown RBP6.15□□□□□ -1.42
CHD4-206ENST00000536999 SIX2Q9NPC8 291 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 UBE2TQ9NPD8 197 aaPredicted RBP6.15□□□□□ -1.42
CHD4-206ENST00000536999 ABCF3Q9NUQ8 709 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 DDX56Q9NY93 547 aaKnown RBP6.15□□□□□ -1.42
CHD4-206ENST00000536999 NAALADL1Q9UQQ1 740 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 ASB3Q9Y575 518 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 PCDHA1Q9Y5I3 950 aa6.15□□□□□ -1.42
CHD4-206ENST00000536999 GAKO14976 1311 aa6.15□□□□□ -1.43
CHD4-206ENST00000536999 MAST2Q6P0Q8 1798 aa6.15□□□□□ -1.43
CHD4-206ENST00000536999 CACNA1GO43497 2377 aa6.15□□□□□ -1.43
CHD4-206ENST00000536999 IGKV6D-41A0A0C4DH26 115 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 GOLGA8QA0A0J9YX86 632 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 ARHGEF35A5YM69 484 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 GOLGA8OA6NCC3 632 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 E9PMD0 336 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 GOLGA8NF8WBI6 632 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 I3L4J1 428 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 ALOX15BO15296 676 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 FAM155BO75949 473 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 KLHL2O95198 593 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 SHBGP04278 402 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 ESRRAP11474 423 aaPredicted RBP6.14□□□□□ -1.43
CHD4-206ENST00000536999 IL1R1P14778 569 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 TAC1P20366 129 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 ABCB4P21439 1286 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 CA4P22748 312 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 PRDX5P30044 214 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 FLT3P36888 993 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 BTDP43251 543 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 MAGEA4P43358 317 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 HSPA13P48723 471 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 RPS6KA3P51812 740 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 CCNHP51946 323 aaPredicted RBP6.14□□□□□ -1.43
CHD4-206ENST00000536999 RAP1GDS1P52306 607 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 AP3M2P53677 418 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 ARL4CP56559 192 aa6.14□□□□□ -1.43
CHD4-206ENST00000536999 GEMIN4P57678 1058 aaKnown RBP6.14□□□□□ -1.43
CHD4-206ENST00000536999 KCNJ2P63252 427 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms