RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 ZNF566Q969W8 418 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 ZC3H10Q96K80 434 aaKnown RBP6.51□□□□□ -1.37
PRKDC-208ENST00000536710 KLHL32Q96NJ5 620 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 MPHOSPH9Q99550 1183 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 REXO4Q9GZR2 422 aaKnown RBP6.51□□□□□ -1.37
PRKDC-208ENST00000536710 GPR35Q9HC97 309 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 A1CFQ9NQ94 594 aaKnown RBP6.51□□□□□ -1.37
PRKDC-208ENST00000536710 GJB4Q9NTQ9 266 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 HECAQ9UBI9 543 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-208ENST00000536710 HDAC9Q9UKV0 1011 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 AGAP1Q9UPQ3 857 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 PAXBP1Q9Y5B6 917 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 DRGXA6NNA5 263 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 PYCARD-AS1I3L0S3 204 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 THAP12O43422 761 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 VPS4BO75351 444 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 KIF20AO95235 890 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 CHEK2O96017 543 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 MT-ND5P03915 603 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 ANXA2P07355 339 aaKnown RBP6.5□□□□□ -1.37
PRKDC-208ENST00000536710 FGFR2P21802 821 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 CFPP27918 469 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 IL6STP40189 918 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-208ENST00000536710 HALP42357 657 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 KRT72Q14CN4 511 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 ELF2Q15723 593 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 PDCD2Q16342 344 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-208ENST00000536710 GGT6Q6P531 493 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 UNC13DQ70J99 1090 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 RNF44Q7L0R7 432 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 SGMS1Q86VZ5 419 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 MICU3Q86XE3 530 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 GSPT2Q8IYD1 628 aaKnown RBP6.5□□□□□ -1.37
PRKDC-208ENST00000536710 FUKQ8N0W3 1084 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 PDPRQ8NCN5 879 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 MDGA1Q8NFP4 955 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 COLEC11Q9BWP8 271 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 TBC1D23Q9NUY8 699 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 FAM30AQ9NZY2 134 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 ZFR2Q9UPR6 939 aaKnown RBP6.5□□□□□ -1.37
PRKDC-208ENST00000536710 CDYLQ9Y232 598 aa6.5□□□□□ -1.37
PRKDC-208ENST00000536710 A0A1W2PPC4 97 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 RAD17O75943 681 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 PRSS23O95084 383 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 PIM1P11309 404 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-208ENST00000536710 HSPA7P48741 367 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 CARSP49589 748 aaKnown RBP6.49□□□□□ -1.37
PRKDC-208ENST00000536710 CSRP2Q16527 193 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 C4orf46Q504U0 113 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 NOMO2Q5JPE7 1267 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 DCAF12L1Q5VU92 463 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 RRAGBQ5VZM2 374 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 TCTN3Q6NUS6 607 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 DRICH1Q6PGQ1 229 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-208ENST00000536710 CCDC174Q6PII3 467 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 BEND5Q7L4P6 421 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 OR52N2Q8NGI0 321 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 OR56A3Q8NH54 315 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 IPCEF1Q8WWN9 437 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-208ENST00000536710 RAPGEF4Q8WZA2 1011 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 HERPUD2Q9BSE4 406 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 CNPPD1Q9BV87 410 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 TLR10Q9BXR5 811 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 MS4A7Q9GZW8 240 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-208ENST00000536710 PPP4R1LQ9P1A2 415 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 XPR1Q9UBH6 696 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 ZNF212Q9UDV6 495 aa6.49□□□□□ -1.37
PRKDC-208ENST00000536710 MORC2Q9Y6X9 1032 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-208ENST00000536710 A0A087WV62 115 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 A0A087WWL8 130 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 KLRG2A4D1S0 409 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-208ENST00000536710 CAPN14A8MX76 684 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 E9PLN8 166 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 ADAMTS3O15072 1205 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 CKBP12277 381 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 KLRC1P26715 233 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 CHKAP35790 457 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 PPM1FP49593 454 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-208ENST00000536710 HTRA4P83105 476 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-208ENST00000536710 MPEG1Q2M385 716 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 SLC35G1Q2M3R5 365 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 XP32Q5T750 250 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 FAM160B1Q5W0V3 765 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 PGBD2Q6P3X8 592 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 CIR1Q86X95 450 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-208ENST00000536710 ANKRD35Q8N283 1001 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 ZNF527Q8NB42 609 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 CCT6BQ92526 530 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 MIEF2Q96C03 454 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 LRRC46Q96FV0 321 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 FMNL2Q96PY5 1086 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 VKORC1Q9BQB6 163 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 MYO1AQ9UBC5 1043 aa6.48□□□□□ -1.37
PRKDC-208ENST00000536710 hCG_1642624A0A1W2PR95 340 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 MBD3L4A6NDZ8 208 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-208ENST00000536710 MBD3L3A6NE82 208 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-208ENST00000536710 POLRMTO00411 1230 aaKnown RBP6.47□□□□□ -1.37
PRKDC-208ENST00000536710 FOXS1O43638 330 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 FCER1AP12319 257 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 EEF1GP26641 437 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms