RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 RABEP1Q15276 862 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 CEP85Q6P2H3 762 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 TMPRSS9Q7Z410 1059 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 KCNK18Q7Z418 384 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 DHX37Q8IY37 1157 aaKnown RBP3.4□□□□□ -1.87
SKA3-207ENST00000536239 SMRP1Q8NCR6 262 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 REPS1Q96D71 796 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 ORAI2Q96SN7 254 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 PRSS22Q9GZN4 317 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 QRSL1Q9H0R6 528 aaKnown RBP3.4□□□□□ -1.87
SKA3-207ENST00000536239 SERTAD4Q9NUC0 356 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 ZBTB21Q9ULJ3 1066 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 NR2E3Q9Y5X4 410 aa3.4□□□□□ -1.87
SKA3-207ENST00000536239 CCDC195A0A1B0GUA6 201 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 MYMKA6NI61 221 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 KCNU1A8MYU2 1149 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 MYO1FO00160 1098 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 TOR1BO14657 336 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 EBLN1P0CF75 366 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 SESN3P58005 492 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 LINC00205P59089 165 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 MC2RQ01718 297 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 MGAT2Q10469 447 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 MALLQ13021 153 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 ATP2B3Q16720 1220 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 PLAC9Q5JTB6 97 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 UTP14CQ5TAP6 766 aaKnown RBP3.39□□□□□ -1.87
SKA3-207ENST00000536239 PXDC1Q5TGL8 231 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 PRAMEF17Q5VTA0 474 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 DLK2Q6UY11 383 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 NIM1KQ8IY84 436 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 CLRN3Q8NCR9 226 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 NSUN7Q8NE18 718 aaKnown RBP3.39□□□□□ -1.87
SKA3-207ENST00000536239 MRFAP1L1Q96HT8 127 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 LRIG1Q96JA1 1093 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 ALG8Q9BVK2 526 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 C11orf54Q9H0W9 315 aaPredicted RBP3.39□□□□□ -1.87
SKA3-207ENST00000536239 SH3BP4Q9P0V3 963 aa3.39□□□□□ -1.87
SKA3-207ENST00000536239 MYBBP1AQ9BQG0 1328 aaKnown RBP3.39□□□□□ -1.87
SKA3-207ENST00000536239 CYP2D7A0A087X1C5 515 aa3.38□□□□□ -1.87
SKA3-207ENST00000536239 SMIM35A0A1B0GVV1 85 aa3.38□□□□□ -1.87
SKA3-207ENST00000536239 PRRT4C9JH25 899 aa3.38□□□□□ -1.87
SKA3-207ENST00000536239 E7ENX8 843 aa3.38□□□□□ -1.87
SKA3-207ENST00000536239 NEMP1O14524 444 aa3.38□□□□□ -1.87
SKA3-207ENST00000536239 RHOP08100 348 aa3.38□□□□□ -1.87
SKA3-207ENST00000536239 FAM163BP0C2L3 166 aa3.38□□□□□ -1.87
SKA3-207ENST00000536239 TAP2Q03519 686 aa3.38□□□□□ -1.87
SKA3-207ENST00000536239 TKFCQ3LXA3 575 aa3.38□□□□□ -1.87
SKA3-207ENST00000536239 KIAA1161Q6NSJ0 714 aa3.38□□□□□ -1.87
SKA3-207ENST00000536239 MEPCEQ7L2J0 689 aaKnown RBP3.38□□□□□ -1.87
SKA3-207ENST00000536239 CFAP52Q8N1V2 620 aa3.38□□□□□ -1.87
SKA3-207ENST00000536239 TGFBRAP1Q8WUH2 860 aa3.38□□□□□ -1.87
SKA3-207ENST00000536239 MANSC1Q9H8J5 431 aa3.38□□□□□ -1.87
SKA3-207ENST00000536239 EHD3Q9NZN3 535 aa3.38□□□□□ -1.87
SKA3-207ENST00000536239 FAM171A2A8MVW0 826 aa3.37□□□□□ -1.87
SKA3-207ENST00000536239 SMIM22K7EJ46 135 aa3.37□□□□□ -1.87
SKA3-207ENST00000536239 ULK1O75385 1050 aa3.37□□□□□ -1.87
SKA3-207ENST00000536239 ZFXP17010 805 aaPredicted RBP3.37□□□□□ -1.87
SKA3-207ENST00000536239 BPIP17213 487 aa3.37□□□□□ -1.87
SKA3-207ENST00000536239 NPTX2P47972 431 aa3.37□□□□□ -1.87
SKA3-207ENST00000536239 CTXN1P60606 82 aa3.37□□□□□ -1.87
SKA3-207ENST00000536239 TRIP6Q15654 476 aaKnown RBP3.37□□□□□ -1.87
SKA3-207ENST00000536239 TAF7LQ5H9L4 462 aa3.37□□□□□ -1.87
SKA3-207ENST00000536239 HOMER1Q86YM7 354 aa3.37□□□□□ -1.87
SKA3-207ENST00000536239 CMIPQ8IY22 773 aa3.37□□□□□ -1.87
SKA3-207ENST00000536239 DCBLD1Q8N8Z6 715 aa3.37□□□□□ -1.87
SKA3-207ENST00000536239 OR2I1PQ8NGU4 316 aa3.37□□□□□ -1.87
SKA3-207ENST00000536239 NSMCE1Q8WV22 266 aa3.37□□□□□ -1.87
SKA3-207ENST00000536239 LMBR1Q8WVP7 490 aa3.37□□□□□ -1.87
SKA3-207ENST00000536239 KLHL32Q96NJ5 620 aa3.37□□□□□ -1.87
SKA3-207ENST00000536239 CAMKK2Q96RR4 588 aa3.37□□□□□ -1.87
SKA3-207ENST00000536239 DKK3Q9UBP4 350 aa3.37□□□□□ -1.87
SKA3-207ENST00000536239 AFG3L2Q9Y4W6 797 aa3.37□□□□□ -1.87
SKA3-207ENST00000536239 GOLGA8AA7E2F4 631 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 E9PSI1 815 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 ZNF213O14771 459 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 ADAMTS3O15072 1205 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 DNAJB5O75953 348 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 JUPP14923 745 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 NDUFB7P17568 137 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 DEKP35659 375 aaKnown RBP3.36□□□□□ -1.87
SKA3-207ENST00000536239 POU6F2P78424 691 aaPredicted RBP3.36□□□□□ -1.87
SKA3-207ENST00000536239 PIGFQ07326 219 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 BMPR2Q13873 1038 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 DAZAP2Q15038 168 aaPredicted RBP3.36□□□□□ -1.87
SKA3-207ENST00000536239 TOR2AQ5JU69 321 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 CATSPERGQ6ZRH7 1159 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 C16orf86Q6ZW13 317 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 ZNF551Q7Z340 670 aaPredicted RBP3.36□□□□□ -1.87
SKA3-207ENST00000536239 GALNT16Q8N428 558 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 FANCBQ8NB91 859 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 FBXO41Q8TF61 875 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 LEO1Q8WVC0 666 aaPredicted RBP3.36□□□□□ -1.87
SKA3-207ENST00000536239 SSH1Q8WYL5 1049 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 TBC1D5Q92609 795 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 MARK4Q96L34 752 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 DNAJC2Q99543 621 aaKnown RBP3.36□□□□□ -1.87
SKA3-207ENST00000536239 PCDHGA2Q9Y5H1 932 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 NOTCH4Q99466 2003 aa3.36□□□□□ -1.87
SKA3-207ENST00000536239 A0A0B4J269 797 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms