RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 NUBP1P53384 320 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 ELAVL2Q12926 359 aaKnown RBP13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 TBX2Q13207 712 aaPredicted RBP13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 DMP1Q13316 513 aaPredicted RBP13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 ADAM9Q13443 819 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 TRIM14Q14142 442 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 CCDC186Q7Z3E2 898 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 CEP57Q86XR8 500 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 PPP1R10Q96QC0 940 aaKnown RBP13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 ACCSQ96QU6 501 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 ACO2Q99798 780 aaKnown RBP13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 MKNK1Q9BUB5 465 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 FGFBP2Q9BYJ0 223 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 PRKD2Q9BZL6 878 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 TMEM134Q9H6X4 195 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 PIDD1Q9HB75 910 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 METTL14Q9HCE5 456 aaKnown RBP13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 IGSF9Q9P2J2 1179 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 ARHGAP28Q9P2N2 729 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 EXOC7Q9UPT5 735 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 ZKSCAN5Q9Y2L8 839 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 DENND4AQ7Z401 1863 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 PHLPP2Q6ZVD8 1323 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 TMEM189-UBE2V1I3L0A0 370 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 SLC16A3O15427 465 aaKnown RBP13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 B3GAT3O94766 335 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 PRPF6O94906 941 aaKnown RBP13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 NMT1P30419 496 aaKnown RBP13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 GRM5P41594 1212 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 MTIF2P46199 727 aaKnown RBP13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 PSMD5Q16401 504 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 MAN2A1Q16706 1144 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 HSP90AA4PQ58FG1 418 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 GLRA4Q5JXX5 417 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 TAS1R3Q7RTX0 852 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 TMC6Q7Z403 805 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 HAUS6Q7Z4H7 955 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 FRMD5Q7Z6J6 570 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 NELFCDQ8IXH7 590 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 TMEM105Q8N8V8 129 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 CEP120Q8N960 986 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 MYADMQ96S97 322 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 TARS2Q9BW92 718 aaKnown RBP13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 MRPL4Q9BYD3 311 aaKnown RBP13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 PTPRHQ9HD43 1115 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 EPS15L1Q9UBC2 864 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 FBXW11Q9UKB1 542 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 DUSP12Q9UNI6 340 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 PLXNA3P51805 1871 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 KMT2EQ8IZD2 1858 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 C2orf16Q68DN1 1984 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 SMIM28A0A1B0GU29 152 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 ADAM12O43184 909 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 TGFB1I1O43294 461 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 NRDCO43847 1150 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 FGFR3P22607 806 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 IGFBP6P24592 240 aaPredicted RBP13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 ZNF568Q3ZCX4 644 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 XKR4Q5GH76 650 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 ASTLQ6HA08 431 aaPredicted RBP13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 PDXDC1Q6P996 788 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 DCLRE1AQ6PJP8 1040 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 CD300LGQ6UXG3 332 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 LRRC8AQ8IWT6 810 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 ERGIC2Q96RQ1 377 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 NUP58Q9BVL2 599 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 IRF2BPLQ9H1B7 796 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 CDT1Q9H211 546 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 VPS16Q9H269 839 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 MFSD1Q9H3U5 465 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 KMT5AQ9NQR1 393 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 DMAC2Q9NW81 257 aa13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.3□□□□□ -0.28
CHRDL2-209ENST00000534276 ESPNB1AK53 854 aa13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 K7ENM7 598 aa13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 MAPK13O15264 365 aa13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 GALR2O43603 387 aaPredicted RBP13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 PROZP22891 400 aa13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 NR2F2P24468 414 aa13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 CLCNKBP51801 687 aa13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 YARSP54577 528 aaKnown RBP13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 MCCD1P59942 119 aaPredicted RBP13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 UPP1Q16831 310 aa13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 VWA3BQ502W6 1294 aa13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 FIGNQ5HY92 759 aa13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 FKBP15Q5T1M5 1219 aa13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 ALKAL1Q6UXT8 129 aa13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 TRIM59Q8IWR1 403 aa13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 TMEM161BQ8NDZ6 487 aa13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 CCDC112Q8NEF3 446 aa13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 RSAD2Q8WXG1 361 aa13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 UROC1Q96N76 676 aa13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 CCDC94Q9BW85 323 aaPredicted RBP13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 TOPORSQ9NS56 1045 aaPredicted RBP13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 TAB2Q9NYJ8 693 aa13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 MTRRQ9UBK8 725 aa13.29□□□□□ -0.28
CHRDL2-209ENST00000534276 MYH11P35749 1972 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 ABLIM1O14639 778 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms