RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 ZNF512Q96ME7 567 aaPredicted RBP11.29□□□□□ -0.6
CAPN1-225ENST00000533704 PYM1Q9BRP8 204 aaKnown RBP11.29□□□□□ -0.6
CAPN1-225ENST00000533704 TRIM9Q9C026 710 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 BLZF1Q9H2G9 400 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 CUEDC2Q9H467 287 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 TMEM206Q9H813 350 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 FAM86C1Q9NVL1 165 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 KBTBD4Q9NVX7 518 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 RBAKQ9NYW8 714 aaPredicted RBP11.29□□□□□ -0.6
CAPN1-225ENST00000533704 CFAP45Q9UL16 551 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 KCNH3Q9ULD8 1083 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 PCDHA7Q9UN72 937 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 YIPF1Q9Y548 306 aa11.29□□□□□ -0.6
CAPN1-225ENST00000533704 ANO9A1A5B4 782 aa11.28□□□□□ -0.6
CAPN1-225ENST00000533704 H0Y858 1186 aa11.28□□□□□ -0.6
CAPN1-225ENST00000533704 CYB561D2O14569 222 aa11.28□□□□□ -0.6
CAPN1-225ENST00000533704 EXTL3O43909 919 aa11.28□□□□□ -0.6
CAPN1-225ENST00000533704 LDHAP00338 332 aaKnown RBP11.28□□□□□ -0.6
CAPN1-225ENST00000533704 KRT19P08727 400 aa11.28□□□□□ -0.6
CAPN1-225ENST00000533704 GJA1P17302 382 aa11.28□□□□□ -0.6
CAPN1-225ENST00000533704 GARTP22102 1010 aa11.28□□□□□ -0.6
CAPN1-225ENST00000533704 WNT7BP56706 349 aa11.28□□□□□ -0.6
CAPN1-225ENST00000533704 TCF15Q12870 199 aa11.28□□□□□ -0.6
CAPN1-225ENST00000533704 DUSP4Q13115 394 aa11.28□□□□□ -0.6
CAPN1-225ENST00000533704 FAM26FQ5R3K3 315 aa11.28□□□□□ -0.6
CAPN1-225ENST00000533704 CWF19L1Q69YN2 538 aaKnown RBP11.28□□□□□ -0.6
CAPN1-225ENST00000533704 PDZD4Q76G19 769 aaPredicted RBP11.28□□□□□ -0.6
CAPN1-225ENST00000533704 ATOH1Q92858 354 aaPredicted RBP11.28□□□□□ -0.6
CAPN1-225ENST00000533704 ZNF560Q96MR9 790 aa11.28□□□□□ -0.6
CAPN1-225ENST00000533704 TMEM209Q96SK2 561 aa11.28□□□□□ -0.6
CAPN1-225ENST00000533704 CEP72Q9P209 647 aa11.28□□□□□ -0.6
CAPN1-225ENST00000533704 WNT16Q9UBV4 365 aa11.28□□□□□ -0.6
CAPN1-225ENST00000533704 SLC27A5Q9Y2P5 690 aa11.28□□□□□ -0.6
CAPN1-225ENST00000533704 TICRRQ7Z2Z1 1910 aa11.28□□□□□ -0.6
CAPN1-225ENST00000533704 KRBA1A5PL33 1030 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 ZNF197O14709 1029 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 PI15O43692 258 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 SOAT2O75908 522 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 VNN2O95498 520 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 ITGB3P05106 788 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 NPR3P17342 541 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 POLR2BP30876 1174 aaKnown RBP11.27□□□□□ -0.61
CAPN1-225ENST00000533704 ALDH1A3P47895 512 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 CLCN5P51795 746 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 EPHB3P54753 998 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 GPC5P78333 572 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 BFSP1Q12934 665 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 GPR17Q13304 367 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 PLD1Q13393 1074 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 SV2CQ496J9 727 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 SLC39A12Q504Y0 691 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 RESP18Q5W5W9 173 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 WSCD1Q658N2 575 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 LMBRD2Q68DH5 695 aaPredicted RBP11.27□□□□□ -0.61
CAPN1-225ENST00000533704 ATL3Q6DD88 541 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 NELFCDQ8IXH7 590 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 GRAMD1CQ8IYS0 662 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 CEP57L1Q8IYX8 460 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 THEM5Q8N1Q8 247 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 GPD1LQ8N335 351 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 ATAD1Q8NBU5 361 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 OR10T2Q8NGX3 314 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 FAM200AQ8TCP9 573 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 CACTINQ8WUQ7 758 aaKnown RBP11.27□□□□□ -0.61
CAPN1-225ENST00000533704 CHAMP1Q96JM3 812 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 PHOX2BQ99453 314 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 SEPT5Q99719 369 aaPredicted RBP11.27□□□□□ -0.61
CAPN1-225ENST00000533704 OXCT2Q9BYC2 517 aaPredicted RBP11.27□□□□□ -0.61
CAPN1-225ENST00000533704 CRISPLD1Q9H336 500 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 SLITRK6Q9H5Y7 841 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 TBC1D17Q9HA65 648 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 PDE11AQ9HCR9 933 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 ASAH2Q9NR71 780 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 ARHGEF3Q9NR81 526 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 DSEQ9UL01 958 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 AGAP1Q9UPQ3 857 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 R3HCC1Q9Y3T6 440 aaKnown RBP11.27□□□□□ -0.61
CAPN1-225ENST00000533704 DENND4CQ5VZ89 1909 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 COL4A3Q01955 1670 aa11.27□□□□□ -0.61
CAPN1-225ENST00000533704 MTMR11A4FU01 709 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 KPNA7A9QM74 516 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 GALR2O43603 387 aaPredicted RBP11.26□□□□□ -0.61
CAPN1-225ENST00000533704 TMEM191BP0C7N4 346 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 AOC1P19801 751 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 PAX3P23760 479 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 HOXD11P31277 338 aaPredicted RBP11.26□□□□□ -0.61
CAPN1-225ENST00000533704 CCR2P41597 374 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 MRE11P49959 708 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 CYP2J2P51589 502 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 POU5F1Q01860 360 aaKnown RBP11.26□□□□□ -0.61
CAPN1-225ENST00000533704 CUL4BQ13620 913 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 MYBPC2Q14324 1141 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 PRSS36Q5K4E3 855 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 CENPPQ6IPU0 288 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 UNC13DQ70J99 1090 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 NT5DC4Q86YG4 428 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 CBWD2Q8IUF1 395 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 CSGALNACT2Q8N6G5 542 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 TTC9BQ8N6N2 239 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 SPATA32Q96LK8 384 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms