RNA–Protein interactions for RNA: ENST00000533478.5

PKD1L2-210, Transcript of polycystin 1 like 2 (gene/pseudogene), humanhuman

TSL 1 (best) BASIC

Gene PKD1L2, Length 5,669 nt, Biotype polymorphic pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1L2-210ENST00000533478 CUL2Q13617 745 aa12.6□□□□□ -0.39
PKD1L2-210ENST00000533478 MAPRE1Q15691 268 aaKnown RBP12.6□□□□□ -0.39
PKD1L2-210ENST00000533478 THEMIS2Q5TEJ8 643 aa12.6□□□□□ -0.39
PKD1L2-210ENST00000533478 GMCL1P1Q8NEA9 526 aa12.6□□□□□ -0.39
PKD1L2-210ENST00000533478 CALML6Q8TD86 181 aa12.6□□□□□ -0.39
PKD1L2-210ENST00000533478 PTPRN2Q92932 1015 aa12.6□□□□□ -0.39
PKD1L2-210ENST00000533478 PABPC5Q96DU9 382 aaKnown RBP12.6□□□□□ -0.39
PKD1L2-210ENST00000533478 ECT2Q9H8V3 914 aa12.6□□□□□ -0.39
PKD1L2-210ENST00000533478 GPBP1L1Q9HC44 474 aaPredicted RBP12.6□□□□□ -0.39
PKD1L2-210ENST00000533478 NAGPAQ9UK23 515 aa12.6□□□□□ -0.39
PKD1L2-210ENST00000533478 KIAA1257Q9ULG3 409 aa12.6□□□□□ -0.39
PKD1L2-210ENST00000533478 NAMPTP43490 491 aa12.6□□□□□ -0.39
PKD1L2-210ENST00000533478 SMAD1Q15797 465 aaKnown RBP12.6□□□□□ -0.39
PKD1L2-210ENST00000533478 DCAF6Q58WW2 860 aa12.6□□□□□ -0.39
PKD1L2-210ENST00000533478 ERO1BQ86YB8 467 aa12.6□□□□□ -0.39
PKD1L2-210ENST00000533478 SLC26A7Q8TE54 656 aa12.6□□□□□ -0.39
PKD1L2-210ENST00000533478 ISCUQ9H1K1 167 aa12.6□□□□□ -0.39
PKD1L2-210ENST00000533478 AFF4Q9UHB7 1163 aaKnown RBP12.6□□□□□ -0.39
PKD1L2-210ENST00000533478 ZC3H11AO75152 810 aaKnown RBP eCLIP12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 GARTP22102 1010 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 EEF1DP29692 281 aaKnown RBP12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 TRIM65Q6PJ69 517 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 TEX12Q9BXU0 123 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 SLC30A1Q9Y6M5 507 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 GOLGA8RI6L899 631 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 HIST1H2AGP0C0S8 130 aaPredicted RBP12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 HIST1H2ADP20671 130 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 MAGEA4P43358 317 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 KCNA1Q09470 495 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 STX3Q13277 289 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 SLC7A14Q8TBB6 771 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 HIST1H2AHQ96KK5 128 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 HIST1H2AJQ99878 128 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 H2AFJQ9BTM1 129 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 SCAF8Q9UPN6 1271 aaKnown RBP12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 FAM47DPA6NHR8 397 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 STK25O00506 426 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 NPTXRO95502 500 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 FAM200BP0CF97 657 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 ABCE1P61221 599 aaKnown RBP12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 ST8SIA6P61647 398 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 RGS9BPQ6ZS82 235 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 KDELC2Q7Z4H8 507 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 RNF168Q8IYW5 571 aaPredicted RBP12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 RIBC1Q8N443 379 aaPredicted RBP12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 ZKSCAN4Q969J2 545 aaPredicted RBP12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 PBXIP1Q96AQ6 731 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 EPN3Q9H201 632 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 RANBP17Q9H2T7 1088 aaKnown RBP12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 MROH8Q9H579 483 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 RIOX1Q9H6W3 641 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 PRDM5Q9NQX1 630 aaPredicted RBP12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 MRGBPQ9NV56 204 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 TLR2O60603 784 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 GTF2A2P52657 109 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 POLE2P56282 527 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 USP10Q14694 798 aaKnown RBP12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 GOLGA7BQ2TAP0 167 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 YAF2Q8IY57 180 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 RAB42Q8N4Z0 105 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 UBA3Q8TBC4 463 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 GLT1D1Q96MS3 346 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 CYP4F11Q9HBI6 524 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 ARHGEF38Q9NXL2 777 aa12.59□□□□□ -0.39
PKD1L2-210ENST00000533478 RGL2O15211 777 aa12.58□□□□□ -0.39
PKD1L2-210ENST00000533478 NDUFS3O75489 264 aa12.58□□□□□ -0.39
PKD1L2-210ENST00000533478 SNRPAP09012 282 aaKnown RBP12.58□□□□□ -0.39
PKD1L2-210ENST00000533478 MCF2P10911 925 aa12.58□□□□□ -0.39
PKD1L2-210ENST00000533478 STIP1P31948 543 aaKnown RBP12.58□□□□□ -0.39
PKD1L2-210ENST00000533478 USP33Q8TEY7 942 aa12.58□□□□□ -0.39
PKD1L2-210ENST00000533478 SLITRK1Q96PX8 696 aa12.58□□□□□ -0.39
PKD1L2-210ENST00000533478 VGLL3A8MV65 326 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 ITGB3P05106 788 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 POLBP06746 335 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 SUPT20HL2P0C7V6 817 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 KRT4P19013 534 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 TOB1P50616 345 aaPredicted RBP12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 PDAP1Q13442 181 aaKnown RBP12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 LONRF1Q17RB8 773 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 COL23A1Q86Y22 540 aaPredicted RBP12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 TMEM106CQ9BVX2 250 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 TSSK1BQ9BXA7 367 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 ALG13Q9NP73 1137 aaKnown RBP12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 CASS4Q9NQ75 786 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 BRD2P25440 801 aaKnown RBP12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 PON1P27169 355 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 FNTAP49354 379 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 SREBF2Q12772 1141 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 Q4G0T1 1027 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 TMEM259Q4ZIN3 620 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 EPC2Q52LR7 807 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 IL31Q6EBC2 164 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 C3orf62Q6ZUJ4 267 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 TTC30AQ86WT1 665 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 N4BP2L2Q92802 583 aaPredicted RBP12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 RMDN2Q96LZ7 410 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 DNAJC7Q99615 494 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 KDM4CQ9H3R0 1056 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 TRPC7Q9HCX4 862 aa12.58□□□□□ -0.4
PKD1L2-210ENST00000533478 IL1R1P14778 569 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms