RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 FAM81BQ96LP2 452 aa13.46□□□□□ -0.25
COPB1-208ENST00000532088 ERGIC2Q96RQ1 377 aa13.46□□□□□ -0.25
COPB1-208ENST00000532088 COLEC11Q9BWP8 271 aa13.46□□□□□ -0.25
COPB1-208ENST00000532088 VPS16Q9H269 839 aa13.46□□□□□ -0.25
COPB1-208ENST00000532088 RAB20Q9NX57 234 aa13.46□□□□□ -0.25
COPB1-208ENST00000532088 MRPL42Q9Y6G3 142 aaKnown RBP13.46□□□□□ -0.25
COPB1-208ENST00000532088 A0A1W2PQC6 194 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 ARHGEF37A1IGU5 675 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 FSD2A1L4K1 749 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 RNF223E7ERA6 249 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 NRP1O14786 923 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 VNN1O95497 513 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 ASS1P00966 412 aaKnown RBP13.45□□□□□ -0.26
COPB1-208ENST00000532088 HLA-DRAP01903 254 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 FAM163BP0C2L3 166 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 LINC00271P0C7V0 271 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 POLR2BP30876 1174 aaKnown RBP13.45□□□□□ -0.26
COPB1-208ENST00000532088 PIK3CAP42336 1068 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 ALDH7A1P49419 539 aaKnown RBP13.45□□□□□ -0.26
COPB1-208ENST00000532088 TAF6P49848 677 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 CLCNKBP51801 687 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 BCAR1P56945 870 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 UBASH3AP57075 661 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 MYO1EQ12965 1108 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 NR1I3Q14994 352 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 LRIT3Q3SXY7 679 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 SV2CQ496J9 727 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 PAN2Q504Q3 1202 aaKnown RBP13.45□□□□□ -0.26
COPB1-208ENST00000532088 GBP6Q6ZN66 633 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 CCDC150Q8NCX0 1101 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 SPATA18Q8TC71 538 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 TAS1R2Q8TE23 839 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 ZNF558Q96NG5 402 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 PLVAPQ9BX97 442 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 IMPG2Q9BZV3 1241 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 GDAP2Q9NXN4 497 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 AGAP1Q9UPQ3 857 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 FAN1Q9Y2M0 1017 aa13.45□□□□□ -0.26
COPB1-208ENST00000532088 CASTOR2A6NHX0 329 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 C5orf67F2Z3F1 127 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 TRAPPC3O43617 180 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 B4GALT3O60512 393 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 CST3P01034 146 aaPredicted RBP13.44□□□□□ -0.26
COPB1-208ENST00000532088 RB1P06400 928 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 OR1G1P47890 313 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 SLC11A1P49279 550 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 GUCY2FP51841 1108 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 ELAVL2Q12926 359 aaKnown RBP13.44□□□□□ -0.26
COPB1-208ENST00000532088 EXOC3L4Q17RC7 722 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 KCNT2Q6UVM3 1135 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 DPH6Q7L8W6 267 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 COLGALT1Q8NBJ5 622 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 EHBP1Q8NDI1 1231 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 LMO3Q8TAP4 145 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 XYLT2Q9H1B5 865 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 MMRN2Q9H8L6 949 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 GOLGA2P5Q9HBQ8 144 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 PLCB1Q9NQ66 1216 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 DNAJB4Q9UDY4 337 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 MSRAQ9UJ68 235 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 PCDHB12Q9Y5F1 795 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 PDE4DIPQ5VU43 2346 aa13.44□□□□□ -0.26
COPB1-208ENST00000532088 LINC01553A4QN01 128 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 GOLGA6L3A6NEY3 463 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 PES1O00541 588 aaKnown RBP13.43□□□□□ -0.26
COPB1-208ENST00000532088 B3GAT3O94766 335 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 KRT19P08727 400 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 P4HA1P13674 534 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 RFX1P22670 979 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 LILRA4P59901 499 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 PLCB3Q01970 1234 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 UBXN1Q04323 297 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 ZNF699Q32M78 642 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 WDR44Q5JSH3 913 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 SPOUT1Q5T280 376 aaKnown RBP13.43□□□□□ -0.26
COPB1-208ENST00000532088 FAM109BQ6ICB4 259 aaPredicted RBP13.43□□□□□ -0.26
COPB1-208ENST00000532088 CD300LGQ6UXG3 332 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 GPR65Q8IYL9 337 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 SLC39A11Q8N1S5 342 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 JAKMIP2Q96AA8 810 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 IQCDQ96DY2 449 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 HPDLQ96IR7 371 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 NAP1L5Q96NT1 182 aaPredicted RBP13.43□□□□□ -0.26
COPB1-208ENST00000532088 MARCH5Q9NX47 278 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 GCNT4Q9P109 453 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 ADAM28Q9UKQ2 775 aa13.43□□□□□ -0.26
COPB1-208ENST00000532088 SF3B1O75533 1304 aaKnown RBP eCLIP13.42□□□□□ -0.26
COPB1-208ENST00000532088 TMEM265A0A087WTH1 108 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 GRXCR1A8MXD5 290 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 KPNA7A9QM74 516 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 M0QZQ0 153 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 TADA2AO75478 443 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 KIF4AO95239 1232 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 EFEMP2O95967 443 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 TBXAS1P24557 533 aaPredicted RBP13.42□□□□□ -0.26
COPB1-208ENST00000532088 PON1P27169 355 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 BMPR1AP36894 532 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 PBX1P40424 430 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 RABGGTBP53611 331 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 MYL6P60660 151 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms