RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 NPTXRO95502 500 aa13.02□□□□□ -0.32
SCN3B-206ENST00000530277 MYBL1P10243 752 aa13.02□□□□□ -0.32
SCN3B-206ENST00000530277 KRT4P19013 534 aa13.02□□□□□ -0.32
SCN3B-206ENST00000530277 TARSP26639 723 aaKnown RBP13.02□□□□□ -0.32
SCN3B-206ENST00000530277 SSTR1P30872 391 aa13.02□□□□□ -0.32
SCN3B-206ENST00000530277 SLC8A1P32418 973 aa13.02□□□□□ -0.32
SCN3B-206ENST00000530277 AP1B1Q10567 949 aa13.02□□□□□ -0.32
SCN3B-206ENST00000530277 TSNAXIP1Q2TAA8 658 aa13.02□□□□□ -0.32
SCN3B-206ENST00000530277 MFSD7Q6UXD7 560 aa13.02□□□□□ -0.32
SCN3B-206ENST00000530277 OR5B17Q8NGF7 314 aa13.02□□□□□ -0.32
SCN3B-206ENST00000530277 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.02□□□□□ -0.32
SCN3B-206ENST00000530277 MYH13Q9UKX3 1938 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 LPXNO60711 386 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 CYP3A4P08684 503 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 CTSHP09668 335 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 ITIH2P19823 946 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 ZBTB41Q5SVQ8 909 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 LRIG3Q6UXM1 1119 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 ANO5Q75V66 913 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 ARMC9Q7Z3E5 817 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 TEX2Q8IWB9 1127 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 PPP4R1Q8TF05 950 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 ZNF606Q8WXB4 792 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 KREMEN1Q96MU8 473 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 NACA2Q9H009 215 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 CISHQ9NSE2 258 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 POLIQ9UNA4 740 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 L3MBTL1Q9Y468 752 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 USP15Q9Y4E8 981 aaPredicted RBP13.02□□□□□ -0.33
SCN3B-206ENST00000530277 SNED1Q8TER0 1413 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 IGF2BP3O00425 579 aaKnown RBP eCLIP13.02□□□□□ -0.33
SCN3B-206ENST00000530277 NDC80O14777 642 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 MAPK13O15264 365 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 PPFIA2O75334 1257 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 SKAP2O75563 359 aaPredicted RBP13.02□□□□□ -0.33
SCN3B-206ENST00000530277 UBOX5O94941 541 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 TNFSF9P41273 254 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 HIRAP54198 1017 aaPredicted RBP13.02□□□□□ -0.33
SCN3B-206ENST00000530277 SEPT6Q14141 434 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 QPCTQ16769 361 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 ATF7IP2Q5U623 682 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 C11orf63Q6NUN7 778 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 LMNTD2Q8IXW0 634 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 ACTL9Q8TC94 416 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 MMP19Q99542 508 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 IFT122Q9HBG6 1241 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 ANKEF1Q9NU02 776 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 XPO7Q9UIA9 1087 aaKnown RBP13.02□□□□□ -0.33
SCN3B-206ENST00000530277 ZFP69BQ9UJL9 534 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 DNPEPQ9ULA0 475 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 SUFUQ9UMX1 484 aa13.02□□□□□ -0.33
SCN3B-206ENST00000530277 CCT8L1PA6NM43 557 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 CLGNO14967 610 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 GYG2O15488 501 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 ATP9BO43861 1147 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 STAMBPO95630 424 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 CCNE2O96020 404 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 MRPS9P82933 396 aaKnown RBP13.01□□□□□ -0.33
SCN3B-206ENST00000530277 KIZQ2M2Z5 673 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 LVRNQ6Q4G3 990 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 IQCKQ8N0W5 287 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 SIX6OS1Q8N1H7 587 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 EXT2Q93063 718 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 WNK4Q96J92 1243 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 RPS6KC1Q96S38 1066 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 TTC1Q99614 292 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 CHKAP35790 457 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 SLC12A2P55011 1212 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 OTUD4Q01804 1114 aaKnown RBP13.01□□□□□ -0.33
SCN3B-206ENST00000530277 PAN2Q504Q3 1202 aaKnown RBP13.01□□□□□ -0.33
SCN3B-206ENST00000530277 PCNX4Q63HM2 1172 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 ENOSF1Q7L5Y1 443 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 MCOLN2Q8IZK6 566 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 RYBPQ8N488 228 aaPredicted RBP13.01□□□□□ -0.33
SCN3B-206ENST00000530277 CCDC97Q96F63 343 aaPredicted RBP13.01□□□□□ -0.33
SCN3B-206ENST00000530277 RAB3IPQ96QF0 476 aaPredicted RBP13.01□□□□□ -0.33
SCN3B-206ENST00000530277 TAF1P21675 1872 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 KAT6AQ92794 2004 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.01□□□□□ -0.33
SCN3B-206ENST00000530277 OPLAHO14841 1288 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 DYNC1LI2O43237 492 aaPredicted RBP13.01□□□□□ -0.33
SCN3B-206ENST00000530277 DDNO94850 711 aaPredicted RBP13.01□□□□□ -0.33
SCN3B-206ENST00000530277 MOCS2O96007 188 aaPredicted RBP13.01□□□□□ -0.33
SCN3B-206ENST00000530277 MAP7D1Q3KQU3 841 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 MROH9Q5TGP6 573 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 SIAH1Q8IUQ4 282 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 C4orf19Q8IY42 314 aa13.01□□□□□ -0.33
SCN3B-206ENST00000530277 KLHL8Q9P2G9 620 aaPredicted RBP13.01□□□□□ -0.33
SCN3B-206ENST00000530277 CYP3A7-CYP3A51PA0A087WV96 503 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 CREB1P16220 341 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 CYP3A7P24462 503 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 PHKA2P46019 1235 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 CTCFP49711 727 aaPredicted RBP13□□□□□ -0.33
SCN3B-206ENST00000530277 CLK2P49760 499 aaKnown RBP13□□□□□ -0.33
SCN3B-206ENST00000530277 FMO1Q01740 532 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 ROR1Q01973 937 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 AGBL2Q5U5Z8 902 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 TATDN1Q6P1N9 297 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 C15orf52Q6ZUT6 534 aaKnown RBP13□□□□□ -0.33
SCN3B-206ENST00000530277 ACOT1Q86TX2 421 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms