RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 KDELC2Q7Z4H8 507 aa8.9□□□□□ -0.98
CTNND1-221ENST00000529873 SYN2Q92777 582 aaPredicted RBP8.9□□□□□ -0.98
CTNND1-221ENST00000529873 FOPNLQ96NB1 174 aa8.9□□□□□ -0.98
CTNND1-221ENST00000529873 ATP11BQ9Y2G3 1177 aa8.9□□□□□ -0.98
CTNND1-221ENST00000529873 LRRIQ1Q96JM4 1722 aa8.9□□□□□ -0.99
CTNND1-221ENST00000529873 NR3C2P08235 984 aa8.9□□□□□ -0.99
CTNND1-221ENST00000529873 ZNF157P51786 506 aaPredicted RBP8.9□□□□□ -0.99
CTNND1-221ENST00000529873 NLRP11P59045 1033 aaKnown RBP8.9□□□□□ -0.99
CTNND1-221ENST00000529873 MED21Q13503 144 aa8.9□□□□□ -0.99
CTNND1-221ENST00000529873 ANGEL2Q5VTE6 544 aaKnown RBP8.9□□□□□ -0.99
CTNND1-221ENST00000529873 LRRC8BQ6P9F7 803 aa8.9□□□□□ -0.99
CTNND1-221ENST00000529873 PATL1Q86TB9 770 aaKnown RBP8.9□□□□□ -0.99
CTNND1-221ENST00000529873 GPRASP2Q96D09 838 aa8.9□□□□□ -0.99
CTNND1-221ENST00000529873 TRIM51Q9BSJ1 452 aa8.9□□□□□ -0.99
CTNND1-221ENST00000529873 NT5C1AQ9BXI3 368 aa8.9□□□□□ -0.99
CTNND1-221ENST00000529873 VIPAS39Q9H9C1 493 aa8.9□□□□□ -0.99
CTNND1-221ENST00000529873 METTL5Q9NRN9 209 aaKnown RBP8.9□□□□□ -0.99
CTNND1-221ENST00000529873 ANKEF1Q9NU02 776 aa8.9□□□□□ -0.99
CTNND1-221ENST00000529873 ZNF229Q9UJW7 825 aa8.9□□□□□ -0.99
CTNND1-221ENST00000529873 FHOD1Q9Y613 1164 aa8.9□□□□□ -0.99
CTNND1-221ENST00000529873 RRN3P2A6NIE6 340 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 H0YC42 278 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 ANGPT2O15123 496 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 DYNC1LI2O43237 492 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-221ENST00000529873 SRP72O76094 671 aaKnown RBP8.89□□□□□ -0.99
CTNND1-221ENST00000529873 NPTXRO95502 500 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 HLA-DRAP01903 254 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 TMEM253P0C7T8 217 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 MYL2P10916 166 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 ANTXR2P58335 489 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 OLFML1Q6UWY5 402 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 KCNV2Q8TDN2 545 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 STAMBPL1Q96FJ0 436 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 OTUB1Q96FW1 271 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-221ENST00000529873 SEPT5Q99719 369 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-221ENST00000529873 EPN3Q9H201 632 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 PAK5Q9P286 719 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 SFMBT1Q9UHJ3 866 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 CDYLQ9Y232 598 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 NEU2Q9Y3R4 380 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 C17orf102A2RUQ5 167 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 SPDYE5A6NIY4 337 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 HBP1O60381 514 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 CHN1P15882 459 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 SESN2P58004 480 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-221ENST00000529873 CCZ1BP86790 482 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 CCZ1P86791 482 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-221ENST00000529873 ZNF200P98182 395 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-221ENST00000529873 SREBF2Q12772 1141 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 SPDYE7PQ495Y7 208 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 GPRC5AQ8NFJ5 357 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 PTPRN2Q92932 1015 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 TMEM106CQ9BVX2 250 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 PRMT7Q9NVM4 692 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-221ENST00000529873 CPS1P31327 1500 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 RNF103-CHMP3A0A140T963 221 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 MEFVO15553 781 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-221ENST00000529873 SPAG6O75602 509 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 SNUPNO95149 360 aaKnown RBP8.89□□□□□ -0.99
CTNND1-221ENST00000529873 CTSHP09668 335 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 HIST1H2AGP0C0S8 130 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-221ENST00000529873 HIST1H2ADP20671 130 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 PNPLA4P41247 253 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 UGP2Q16851 508 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 HIST1H2AHQ96KK5 128 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 HIST1H2AJQ99878 128 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 H2AFJQ9BTM1 129 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 CYP4F11Q9HBI6 524 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 CNGB3Q9NQW8 809 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 ZSCAN32Q9NX65 697 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 AIPL1Q9NZN9 384 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 ZC3H7BQ9UGR2 993 aaKnown RBP8.89□□□□□ -0.99
CTNND1-221ENST00000529873 TCP11X1B4DZS4 312 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 PRR23D1E9PI22 279 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-221ENST00000529873 PRR23D2P0DMB1 279 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-221ENST00000529873 VCAM1P19320 739 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 MDH1P40925 334 aaKnown RBP8.89□□□□□ -0.99
CTNND1-221ENST00000529873 SERPINB4P48594 390 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 VCPP55072 806 aaKnown RBP8.89□□□□□ -0.99
CTNND1-221ENST00000529873 ACTR2P61160 394 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 PDK1Q15118 436 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 ZC2HC1CQ53FD0 456 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-221ENST00000529873 KHDRBS2Q5VWX1 349 aaKnown RBP8.89□□□□□ -0.99
CTNND1-221ENST00000529873 IL31Q6EBC2 164 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 NOTUMQ6P988 496 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 SLC30A9Q6PML9 568 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 SNX31Q8N9S9 440 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 ZNF555Q8NEP9 628 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 WDR24Q96S15 920 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 MKNK1Q9BUB5 465 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 YIPF3Q9GZM5 350 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 ERAP1Q9NZ08 941 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 PCDHGB4Q9UN71 923 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 ARL2BPQ9Y2Y0 163 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 SUPT3HB4E1H0 165 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 CAND2O75155 1236 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 SUPT3HO75486 399 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 ENO1P06733 434 aaKnown RBP8.89□□□□□ -0.99
CTNND1-221ENST00000529873 HMBSP08397 361 aa8.89□□□□□ -0.99
CTNND1-221ENST00000529873 LONRF1Q17RB8 773 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms