RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 NLGN4YQ8NFZ3 816 aaPredicted RBP5.76□□□□□ -1.49
C11orf88-204ENST00000529661 DMRTA2Q96SC8 542 aa5.76□□□□□ -1.49
C11orf88-204ENST00000529661 CGRRF1Q99675 332 aa5.76□□□□□ -1.49
C11orf88-204ENST00000529661 COMMD10Q9Y6G5 202 aa5.76□□□□□ -1.49
C11orf88-204ENST00000529661 GRID2IPA4D2P6 1211 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 FOSP01100 380 aaPredicted RBP5.75□□□□□ -1.49
C11orf88-204ENST00000529661 RPLP2P05387 115 aaKnown RBP5.75□□□□□ -1.49
C11orf88-204ENST00000529661 ITGAMP11215 1152 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 SLC6A4P31645 630 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 CXADRP78310 365 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 OS9Q13438 667 aaPredicted RBP5.75□□□□□ -1.49
C11orf88-204ENST00000529661 PABPC1LQ4VXU2 614 aaKnown RBP5.75□□□□□ -1.49
C11orf88-204ENST00000529661 THEMIS2Q5TEJ8 643 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 HECTD2Q5U5R9 776 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 ARMC6Q6NXE6 501 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 NPNTQ6UXI9 565 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 Q6YL49 198 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 TTC7BQ86TV6 843 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 CERS3Q8IU89 383 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 SMC5Q8IY18 1101 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 FAM156AQ8NDB6 213 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 SUPT20HQ8NEM7 779 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 MORC4Q8TE76 937 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 NSUN6Q8TEA1 469 aaKnown RBP5.75□□□□□ -1.49
C11orf88-204ENST00000529661 NUP133Q8WUM0 1156 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 ASB10Q8WXI3 467 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 MRGPRX4Q96LA9 322 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 AGAP2Q99490 1192 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 MPHOSPH6Q99547 160 aaKnown RBP5.75□□□□□ -1.49
C11orf88-204ENST00000529661 POLR3GLQ9BT43 218 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 PACSIN1Q9BY11 444 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 DKK2Q9UBU2 259 aa5.75□□□□□ -1.49
C11orf88-204ENST00000529661 TESQ9UGI8 421 aaKnown RBP5.75□□□□□ -1.49
C11orf88-204ENST00000529661 A0A088AWK7 358 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 FAM227AF5H4B4 570 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 SLC16A6O15403 523 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 FCER1AP12319 257 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 HTR1BP28222 390 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 IL12RB1P42701 662 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 NEK3P51956 506 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 TLE1Q04724 770 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 MORC3Q14149 939 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 BRD3Q15059 726 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 ANO6Q4KMQ2 910 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 UTP14CQ5TAP6 766 aaKnown RBP5.74□□□□□ -1.49
C11orf88-204ENST00000529661 PCSK4Q6UW60 755 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 CAVIN3Q969G5 261 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 PNKPQ96T60 521 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 VRK1Q99986 396 aaPredicted RBP5.74□□□□□ -1.49
C11orf88-204ENST00000529661 NAA15Q9BXJ9 866 aaKnown RBP5.74□□□□□ -1.49
C11orf88-204ENST00000529661 MYH16Q9H6N6 1097 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 KMT5AQ9NQR1 393 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 HSFX1Q9UBD0 423 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 KCNE5Q9UJ90 142 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 PACSIN3Q9UKS6 424 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 CDYLQ9Y232 598 aa5.74□□□□□ -1.49
C11orf88-204ENST00000529661 PMM2O15305 246 aa5.73□□□□□ -1.49
C11orf88-204ENST00000529661 AGFG2O95081 481 aa5.73□□□□□ -1.49
C11orf88-204ENST00000529661 SLC5A1P13866 664 aa5.73□□□□□ -1.49
C11orf88-204ENST00000529661 AVPR1BP47901 424 aa5.73□□□□□ -1.49
C11orf88-204ENST00000529661 MAP2K6P52564 334 aa5.73□□□□□ -1.49
C11orf88-204ENST00000529661 HK3P52790 923 aa5.73□□□□□ -1.49
C11orf88-204ENST00000529661 FAM193AP78312 1265 aa5.73□□□□□ -1.49
C11orf88-204ENST00000529661 SLFN5Q08AF3 891 aa5.73□□□□□ -1.49
C11orf88-204ENST00000529661 SEMA5AQ13591 1074 aa5.73□□□□□ -1.49
C11orf88-204ENST00000529661 KHDC1Q4VXA5 237 aaKnown RBP5.73□□□□□ -1.49
C11orf88-204ENST00000529661 ABHD17BQ5VST6 288 aa5.73□□□□□ -1.49
C11orf88-204ENST00000529661 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.73□□□□□ -1.49
C11orf88-204ENST00000529661 GPR150Q8NGU9 434 aa5.73□□□□□ -1.49
C11orf88-204ENST00000529661 KLHDC4Q8TBB5 520 aa5.73□□□□□ -1.49
C11orf88-204ENST00000529661 STRBPQ96SI9 672 aaKnown RBP5.73□□□□□ -1.49
C11orf88-204ENST00000529661 TLR10Q9BXR5 811 aa5.73□□□□□ -1.49
C11orf88-204ENST00000529661 BHMT2Q9H2M3 363 aa5.73□□□□□ -1.49
C11orf88-204ENST00000529661 GALNT9Q9HCQ5 603 aa5.73□□□□□ -1.49
C11orf88-204ENST00000529661 CALCOCO1Q9P1Z2 691 aa5.73□□□□□ -1.49
C11orf88-204ENST00000529661 C11orf21Q9P2W6 132 aa5.73□□□□□ -1.49
C11orf88-204ENST00000529661 FAM50BQ9Y247 325 aa5.73□□□□□ -1.49
C11orf88-204ENST00000529661 PIPSLA2A3N6 862 aa5.72□□□□□ -1.49
C11orf88-204ENST00000529661 LRRC14BA6NHZ5 514 aa5.72□□□□□ -1.49
C11orf88-204ENST00000529661 EIF3JO75822 258 aaKnown RBP5.72□□□□□ -1.49
C11orf88-204ENST00000529661 RHOBTB3O94955 611 aa5.72□□□□□ -1.49
C11orf88-204ENST00000529661 LDHAP00338 332 aaKnown RBP5.72□□□□□ -1.49
C11orf88-204ENST00000529661 IFIT2P09913 472 aaKnown RBP5.72□□□□□ -1.49
C11orf88-204ENST00000529661 HKR1P10072 659 aa5.72□□□□□ -1.49
C11orf88-204ENST00000529661 HTR3AP46098 478 aa5.72□□□□□ -1.49
C11orf88-204ENST00000529661 TAP1Q03518 808 aa5.72□□□□□ -1.49
C11orf88-204ENST00000529661 KIAA0753Q2KHM9 967 aa5.72□□□□□ -1.49
C11orf88-204ENST00000529661 FLYWCH1Q4VC44 716 aa5.72□□□□□ -1.49
C11orf88-204ENST00000529661 RNF220Q5VTB9 566 aa5.72□□□□□ -1.49
C11orf88-204ENST00000529661 DARS2Q6PI48 645 aaKnown RBP5.72□□□□□ -1.49
C11orf88-204ENST00000529661 CCDC149Q6ZUS6 474 aa5.72□□□□□ -1.49
C11orf88-204ENST00000529661 GPR149Q86SP6 731 aa5.72□□□□□ -1.49
C11orf88-204ENST00000529661 SLC44A3Q8N4M1 653 aa5.72□□□□□ -1.49
C11orf88-204ENST00000529661 CDK5RAP3Q96JB5 506 aa5.72□□□□□ -1.49
C11orf88-204ENST00000529661 B3GNT5Q9BYG0 378 aa5.72□□□□□ -1.49
C11orf88-204ENST00000529661 SLC45A2Q9UMX9 530 aa5.72□□□□□ -1.49
C11orf88-204ENST00000529661 POLHQ9Y253 713 aa5.72□□□□□ -1.49
C11orf88-204ENST00000529661 STXBP5LQ9Y2K9 1186 aa5.72□□□□□ -1.49
C11orf88-204ENST00000529661 GOLIM4O00461 696 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 EGR2P11161 476 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms