RNA–Protein interactions for RNA: ENST00000529506.5

CMTM1-213, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-213ENST00000529506 SEMA4AQ9H3S1 761 aa19.2■□□□□ 0.66
CMTM1-213ENST00000529506 CUEDC2Q9H467 287 aa19.2■□□□□ 0.66
CMTM1-213ENST00000529506 FOXD4L1Q9NU39 408 aa19.2■□□□□ 0.66
CMTM1-213ENST00000529506 PANK4Q9NVE7 773 aa19.2■□□□□ 0.66
CMTM1-213ENST00000529506 MRPS17Q9Y2R5 130 aaKnown RBP19.2■□□□□ 0.66
CMTM1-213ENST00000529506 SPTLC2O15270 562 aa19.19■□□□□ 0.66
CMTM1-213ENST00000529506 FGF19O95750 216 aa19.19■□□□□ 0.66
CMTM1-213ENST00000529506 CYP11A1P05108 521 aa19.19■□□□□ 0.66
CMTM1-213ENST00000529506 MYL4P12829 197 aa19.19■□□□□ 0.66
CMTM1-213ENST00000529506 GARTP22102 1010 aa19.19■□□□□ 0.66
CMTM1-213ENST00000529506 PNPLA4P41247 253 aa19.19■□□□□ 0.66
CMTM1-213ENST00000529506 MAGEA9P43362 315 aa19.19■□□□□ 0.66
CMTM1-213ENST00000529506 TUFMP49411 452 aaKnown RBP19.19■□□□□ 0.66
CMTM1-213ENST00000529506 GUCY2FP51841 1108 aa19.19■□□□□ 0.66
CMTM1-213ENST00000529506 DUSP4Q13115 394 aa19.19■□□□□ 0.66
CMTM1-213ENST00000529506 ITIH5Q86UX2 942 aa19.19■□□□□ 0.66
CMTM1-213ENST00000529506 LINC00301Q8NCQ3 95 aa19.19■□□□□ 0.66
CMTM1-213ENST00000529506 NKD2Q969F2 451 aaPredicted RBP19.19■□□□□ 0.66
CMTM1-213ENST00000529506 BORCS6Q96GS4 357 aa19.19■□□□□ 0.66
CMTM1-213ENST00000529506 CEP72Q9P209 647 aa19.19■□□□□ 0.66
CMTM1-213ENST00000529506 RIF1Q5UIP0 2472 aaKnown RBP19.19■□□□□ 0.66
CMTM1-213ENST00000529506 CYB561D2O14569 222 aa19.18■□□□□ 0.66
CMTM1-213ENST00000529506 KIAA0391O15091 583 aaKnown RBP19.18■□□□□ 0.66
CMTM1-213ENST00000529506 HSP90AA1P07900 732 aaKnown RBP19.18■□□□□ 0.66
CMTM1-213ENST00000529506 NFICP08651 508 aa19.18■□□□□ 0.66
CMTM1-213ENST00000529506 CEBPBP17676 345 aa19.18■□□□□ 0.66
CMTM1-213ENST00000529506 SV2CQ496J9 727 aa19.18■□□□□ 0.66
CMTM1-213ENST00000529506 TANGO2Q6ICL3 276 aa19.18■□□□□ 0.66
CMTM1-213ENST00000529506 CENPPQ6IPU0 288 aa19.18■□□□□ 0.66
CMTM1-213ENST00000529506 PJA1Q8NG27 643 aa19.18■□□□□ 0.66
CMTM1-213ENST00000529506 C2orf15Q8WU43 125 aaKnown RBP19.18■□□□□ 0.66
CMTM1-213ENST00000529506 DNASE1L2Q92874 299 aa19.18■□□□□ 0.66
CMTM1-213ENST00000529506 SMARCD2Q92925 531 aa19.18■□□□□ 0.66
CMTM1-213ENST00000529506 IRF7Q92985 503 aa19.18■□□□□ 0.66
CMTM1-213ENST00000529506 ZNF560Q96MR9 790 aa19.18■□□□□ 0.66
CMTM1-213ENST00000529506 PGLYRP2Q96PD5 576 aa19.18■□□□□ 0.66
CMTM1-213ENST00000529506 DDX23Q9BUQ8 820 aaKnown RBP19.18■□□□□ 0.66
CMTM1-213ENST00000529506 TRMT61BQ9BVS5 477 aaKnown RBP19.18■□□□□ 0.66
CMTM1-213ENST00000529506 BCO2Q9BYV7 579 aa19.18■□□□□ 0.66
CMTM1-213ENST00000529506 TBC1D7Q9P0N9 293 aa19.18■□□□□ 0.66
CMTM1-213ENST00000529506 R3HCC1Q9Y3T6 440 aaKnown RBP19.18■□□□□ 0.66
CMTM1-213ENST00000529506 YIPF1Q9Y548 306 aa19.18■□□□□ 0.66
CMTM1-213ENST00000529506 FRMD3A2A2Y4 597 aa19.17■□□□□ 0.66
CMTM1-213ENST00000529506 DCNP07585 359 aaKnown RBP19.17■□□□□ 0.66
CMTM1-213ENST00000529506 ADSSP30520 456 aa19.17■□□□□ 0.66
CMTM1-213ENST00000529506 FAM78AQ5JUQ0 283 aa19.17■□□□□ 0.66
CMTM1-213ENST00000529506 CRELD2Q6UXH1 353 aaPredicted RBP19.17■□□□□ 0.66
CMTM1-213ENST00000529506 C1orf210Q8IVY1 113 aa19.17■□□□□ 0.66
CMTM1-213ENST00000529506 PDILTQ8N807 584 aa19.17■□□□□ 0.66
CMTM1-213ENST00000529506 IQUBQ8NA54 791 aa19.17■□□□□ 0.66
CMTM1-213ENST00000529506 TCEAL4Q96EI5 215 aa19.17■□□□□ 0.66
CMTM1-213ENST00000529506 ASB16Q96NS5 453 aa19.17■□□□□ 0.66
CMTM1-213ENST00000529506 PYM1Q9BRP8 204 aaKnown RBP19.17■□□□□ 0.66
CMTM1-213ENST00000529506 FAM213AQ9BRX8 229 aa19.17■□□□□ 0.66
CMTM1-213ENST00000529506 TNMDQ9H2S6 317 aa19.17■□□□□ 0.66
CMTM1-213ENST00000529506 BRD9Q9H8M2 597 aa19.17■□□□□ 0.66
CMTM1-213ENST00000529506 FAM170BA6NMN3 283 aa19.16■□□□□ 0.66
CMTM1-213ENST00000529506 KPNA7A9QM74 516 aa19.16■□□□□ 0.66
CMTM1-213ENST00000529506 TISP43B9A030 160 aa19.16■□□□□ 0.66
CMTM1-213ENST00000529506 MAN2B1O00754 1011 aa19.16■□□□□ 0.66
CMTM1-213ENST00000529506 PPEF2O14830 753 aa19.16■□□□□ 0.66
CMTM1-213ENST00000529506 YEATS4O95619 227 aa19.16■□□□□ 0.66
CMTM1-213ENST00000529506 OR4Q2P0C623 313 aa19.16■□□□□ 0.66
CMTM1-213ENST00000529506 PSMC3P17980 439 aa19.16■□□□□ 0.66
CMTM1-213ENST00000529506 ZNF852Q6ZMS4 543 aa19.16■□□□□ 0.66
CMTM1-213ENST00000529506 HSCBQ8IWL3 235 aa19.16■□□□□ 0.66
CMTM1-213ENST00000529506 DCP1BQ8IZD4 617 aaKnown RBP19.16■□□□□ 0.66
CMTM1-213ENST00000529506 HS6ST3Q8IZP7 471 aa19.16■□□□□ 0.66
CMTM1-213ENST00000529506 DEPDC1BQ8WUY9 529 aa19.16■□□□□ 0.66
CMTM1-213ENST00000529506 TRPV4Q9HBA0 871 aa19.16■□□□□ 0.66
CMTM1-213ENST00000529506 TRPV5Q9NQA5 729 aa19.16■□□□□ 0.66
CMTM1-213ENST00000529506 DLGAP2Q9P1A6 1054 aa19.16■□□□□ 0.66
CMTM1-213ENST00000529506 TFIP11Q9UBB9 837 aaKnown RBP19.16■□□□□ 0.66
CMTM1-213ENST00000529506 FAM186AA6NE01 2351 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 MTMR11A4FU01 709 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 TULP1O00294 542 aaPredicted RBP19.15■□□□□ 0.66
CMTM1-213ENST00000529506 SPTLC1O15269 473 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 EXTL3O43909 919 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 CUTAO60888 179 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 CCR2P41597 374 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 UBXN2BQ14CS0 331 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 VEPH1Q14D04 833 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 SURF1Q15526 300 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 TAF12Q16514 161 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 ATL3Q6DD88 541 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 ZC3H14Q6PJT7 736 aaKnown RBP19.15■□□□□ 0.66
CMTM1-213ENST00000529506 FRMD5Q7Z6J6 570 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 DNAJB7Q7Z6W7 309 aaPredicted RBP19.15■□□□□ 0.66
CMTM1-213ENST00000529506 ATAD1Q8NBU5 361 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 SPPL2BQ8TCT7 592 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 PLA2G2FQ9BZM2 168 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 FOXQ1Q9C009 403 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 ZCWPW1Q9H0M4 648 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 SLITRK6Q9H5Y7 841 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 SLC27A5Q9Y2P5 690 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 SCN1AP35498 2009 aa19.15■□□□□ 0.66
CMTM1-213ENST00000529506 ANK1P16157 1881 aa19.14■□□□□ 0.65
CMTM1-213ENST00000529506 PRR23AA6NEV1 266 aa19.14■□□□□ 0.65
CMTM1-213ENST00000529506 GLULP15104 373 aa19.14■□□□□ 0.65
CMTM1-213ENST00000529506 TFAMQ00059 246 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms