RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 MATR3P43243 847 aaKnown RBP eCLIP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 SCNN1GP51170 649 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 GTF2A1P52655 376 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 YARSP54577 528 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 OSTNP61366 133 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 SNRPFP62306 86 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 RNASELQ05823 741 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 DSC1Q08554 894 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 PNOCQ13519 176 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 CAMK1Q14012 370 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 KCNB1Q14721 858 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 NAB2Q15742 525 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 BMT2Q1RMZ1 405 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 SLC10A6Q3KNW5 377 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 SEZ6Q53EL9 994 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 SWT1Q5T5J6 900 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 KLHL10Q6JEL2 608 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 ZSCAN30Q86W11 494 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 COLGALT2Q8IYK4 626 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 SYCP3Q8IZU3 236 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 SPATA20Q8TB22 786 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 CCDC47Q96A33 483 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 ZNF558Q96NG5 402 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 FAM193BQ96PV7 902 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 GSDMAQ96QA5 445 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 GAS2L1Q99501 681 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 OCSTAMPQ9BR26 566 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 TMEM175Q9BSA9 504 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 C11orf84Q9BUA3 381 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 MSTO1Q9BUK6 570 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 PLEKHA5Q9HAU0 1116 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 ALG13Q9NP73 1137 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 MED4Q9NPJ6 270 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 TOPORSQ9NS56 1045 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 LMBRD1Q9NUN5 540 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 EXOC1Q9NV70 894 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 FANCLQ9NW38 375 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 CHCHD3Q9NX63 227 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 SPG21Q9NZD8 308 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 ANKFY1Q9P2R3 1169 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 DNAJB4Q9UDY4 337 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 CPSF3Q9UKF6 684 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 PCDHA5Q9Y5H7 936 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 MTCH2Q9Y6C9 303 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 MYH11P35749 1972 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 FNDC1Q4ZHG4 1894 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 SMIM28A0A1B0GU29 152 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 TTC26A0AVF1 554 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 CCDC66A2RUB6 948 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 GRM6O15303 877 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 TGFB1I1O43294 461 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 B4GALT3O60512 393 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 KINO60870 393 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 ZC3H11AO75152 810 aaKnown RBP eCLIP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 FGF18O76093 207 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 LDHAP00338 332 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 HARSP12081 509 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 KCNE1P15382 129 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 IGFBP4P22692 258 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 DNAJB1P25685 340 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 MZF1P28698 734 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 PPM1AP35813 382 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 PBX3P40426 434 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 TNFSF9P41273 254 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 SLC11A1P49279 550 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 ACOT2P49753 483 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 KRT17Q04695 432 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 UBE3AQ05086 875 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 GRIK3Q13003 919 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 ZBTB6Q15916 424 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 KNOP1Q1ED39 458 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 C11orf91Q3C1V1 193 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 ZBTB41Q5SVQ8 909 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 CCDC70Q6NSX1 233 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 C16orf87Q6PH81 154 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 CRELD2Q6UXH1 353 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 TTC30AQ86WT1 665 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 ANKRD13BQ86YJ7 626 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 SLC39A11Q8N1S5 342 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 KIAA0895Q8NCT3 520 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 VPS37AQ8NEZ2 397 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 GDPD5Q8WTR4 605 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 POF1BQ8WVV4 589 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 POMGNT1Q8WZA1 660 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 RELTQ969Z4 430 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 IGSF21Q96ID5 467 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 SNX27Q96L92 541 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 ZMAT2Q96NC0 199 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 GBP4Q96PP9 640 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 PPP1R10Q96QC0 940 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 IER2Q9BTL4 223 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 TRIM55Q9BYV6 548 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 NIF3L1Q9GZT8 377 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 GBP3Q9H0R5 595 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 LMAN2LQ9H0V9 348 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 RETREG1Q9H6L5 497 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 RPF1Q9H9Y2 349 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 NEUROD4Q9HD90 331 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 CNTN3Q9P232 1028 aa6.79□□□□□ -1.32
ATPAF1-209ENST00000529214 HOOK1Q9UJC3 728 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms