RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 ADAM2Q99965 735 aa21.88■■□□□ 1.09
SMCO4-203ENST00000526869 BARX2Q9UMQ3 279 aaPredicted RBP21.88■■□□□ 1.09
SMCO4-203ENST00000526869 PCDHGC3Q9UN70 934 aa21.88■■□□□ 1.09
SMCO4-203ENST00000526869 TMCO5BA8MYB1 307 aa21.87■■□□□ 1.09
SMCO4-203ENST00000526869 INPPL1O15357 1258 aa21.87■■□□□ 1.09
SMCO4-203ENST00000526869 GPC5P78333 572 aa21.87■■□□□ 1.09
SMCO4-203ENST00000526869 CENPCQ03188 943 aa21.87■■□□□ 1.09
SMCO4-203ENST00000526869 SV2CQ496J9 727 aa21.87■■□□□ 1.09
SMCO4-203ENST00000526869 AGMOQ6ZNB7 445 aa21.87■■□□□ 1.09
SMCO4-203ENST00000526869 TMEM130Q8N3G9 435 aa21.87■■□□□ 1.09
SMCO4-203ENST00000526869 MYRIPQ8NFW9 859 aa21.87■■□□□ 1.09
SMCO4-203ENST00000526869 ZNF606Q8WXB4 792 aa21.87■■□□□ 1.09
SMCO4-203ENST00000526869 FTHL17Q9BXU8 183 aa21.87■■□□□ 1.09
SMCO4-203ENST00000526869 RGS18Q9NS28 235 aa21.87■■□□□ 1.09
SMCO4-203ENST00000526869 GDAP2Q9NXN4 497 aa21.87■■□□□ 1.09
SMCO4-203ENST00000526869 GTF3C4Q9UKN8 822 aa21.87■■□□□ 1.09
SMCO4-203ENST00000526869 KIAA1257Q9ULG3 409 aa21.87■■□□□ 1.09
SMCO4-203ENST00000526869 PPEF2O14830 753 aa21.86■■□□□ 1.09
SMCO4-203ENST00000526869 MED7O43513 233 aa21.86■■□□□ 1.09
SMCO4-203ENST00000526869 BUB1O43683 1085 aa21.86■■□□□ 1.09
SMCO4-203ENST00000526869 MTA2O94776 668 aa21.86■■□□□ 1.09
SMCO4-203ENST00000526869 FAM163BP0C2L3 166 aa21.86■■□□□ 1.09
SMCO4-203ENST00000526869 MYBL1P10243 752 aa21.86■■□□□ 1.09
SMCO4-203ENST00000526869 CAPN2P17655 700 aa21.86■■□□□ 1.09
SMCO4-203ENST00000526869 RAP1GAPP47736 663 aa21.86■■□□□ 1.09
SMCO4-203ENST00000526869 RAD23BP54727 409 aa21.86■■□□□ 1.09
SMCO4-203ENST00000526869 NAP1L1P55209 391 aaKnown RBP21.86■■□□□ 1.09
SMCO4-203ENST00000526869 AMPD2Q01433 879 aa21.86■■□□□ 1.09
SMCO4-203ENST00000526869 ANKRD33Q7Z3H0 272 aa21.86■■□□□ 1.09
SMCO4-203ENST00000526869 ECHDC2Q86YB7 292 aa21.86■■□□□ 1.09
SMCO4-203ENST00000526869 UBE2Q2Q8WVN8 375 aa21.86■■□□□ 1.09
SMCO4-203ENST00000526869 THAP2Q9H0W7 228 aa21.86■■□□□ 1.09
SMCO4-203ENST00000526869 PDCL3Q9H2J4 239 aa21.86■■□□□ 1.09
SMCO4-203ENST00000526869 MRFAP1Q9Y605 127 aa21.86■■□□□ 1.09
SMCO4-203ENST00000526869 CENPFP49454 3210 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 ARL5CA6NH57 179 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 CYP1A2P05177 515 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 THP07101 528 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 CDH5P33151 784 aaPredicted RBP21.85■■□□□ 1.09
SMCO4-203ENST00000526869 MLH1P40692 756 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 TAF6P49848 677 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 MNX1P50219 401 aaPredicted RBP21.85■■□□□ 1.09
SMCO4-203ENST00000526869 CDH8P55286 799 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 NOMO3P69849 1222 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 SOX4Q06945 474 aaPredicted RBP21.85■■□□□ 1.09
SMCO4-203ENST00000526869 C1orf53Q5VUE5 145 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 LIMS2Q7Z4I7 341 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 ZNF598Q86UK7 904 aaKnown RBP21.85■■□□□ 1.09
SMCO4-203ENST00000526869 ANKLE1Q8NAG6 615 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 GSTCDQ8NEC7 633 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 TPCN2Q8NHX9 752 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 WHAMMQ8TF30 809 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 VCPIP1Q96JH7 1222 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 ZFP42Q96MM3 310 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 GAD1Q99259 594 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 ZNF518BQ9C0D4 1074 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 RSAD1Q9HA92 442 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 AVENQ9NQS1 362 aaPredicted RBP21.85■■□□□ 1.09
SMCO4-203ENST00000526869 CDC23Q9UJX2 597 aa21.85■■□□□ 1.09
SMCO4-203ENST00000526869 GRID2IPA4D2P6 1211 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 PARNO95453 639 aaKnown RBP21.84■■□□□ 1.09
SMCO4-203ENST00000526869 EOMESO95936 686 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 MYCP01106 439 aaPredicted RBP21.84■■□□□ 1.09
SMCO4-203ENST00000526869 CALCAP01258 141 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 PRLRP16471 622 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 ABCB4P21439 1286 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 PAX3P23760 479 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 GTF2F1P35269 517 aaKnown RBP eCLIP21.84■■□□□ 1.096e-6■■■■□ 21.5
SMCO4-203ENST00000526869 NOP2P46087 812 aaKnown RBP21.84■■□□□ 1.09
SMCO4-203ENST00000526869 NSFP46459 744 aaKnown RBP21.84■■□□□ 1.09
SMCO4-203ENST00000526869 FAM189BP81408 668 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 SLFN11Q7Z7L1 901 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 UNC93AQ86WB7 457 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 DNAAF5Q86Y56 855 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 PHF13Q86YI8 300 aaPredicted RBP21.84■■□□□ 1.09
SMCO4-203ENST00000526869 SYCE1Q8N0S2 351 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 LRRC57Q8N9N7 239 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 SLC4A11Q8NBS3 891 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 SLC35G2Q8TBE7 412 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 ARHGEF26Q96DR7 871 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 TMEM176AQ96HP8 235 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 TOX2Q96NM4 488 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 MMS19Q96T76 1030 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 ELOVL4Q9GZR5 314 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 DNAI2Q9GZS0 605 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 PUF60Q9UHX1 559 aaKnown RBP21.84■■□□□ 1.09
SMCO4-203ENST00000526869 SNX9Q9Y5X1 595 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 SCN1AP35498 2009 aa21.84■■□□□ 1.09
SMCO4-203ENST00000526869 TANC1Q9C0D5 1861 aa21.83■■□□□ 1.09
SMCO4-203ENST00000526869 MEIS3P2A8K0S8 358 aa21.83■■□□□ 1.09
SMCO4-203ENST00000526869 KPNA7A9QM74 516 aa21.83■■□□□ 1.09
SMCO4-203ENST00000526869 C9IYK1 514 aa21.83■■□□□ 1.09
SMCO4-203ENST00000526869 PALMO75781 387 aa21.83■■□□□ 1.09
SMCO4-203ENST00000526869 TFRCP02786 760 aaKnown RBP21.83■■□□□ 1.09
SMCO4-203ENST00000526869 ATP1A1P05023 1023 aaKnown RBP21.83■■□□□ 1.09
SMCO4-203ENST00000526869 VDRP11473 427 aa21.83■■□□□ 1.09
SMCO4-203ENST00000526869 COL6A1P12109 1028 aa21.83■■□□□ 1.09
SMCO4-203ENST00000526869 BRD2P25440 801 aaKnown RBP21.83■■□□□ 1.09
SMCO4-203ENST00000526869 RPL9P32969 192 aaKnown RBP21.83■■□□□ 1.09
SMCO4-203ENST00000526869 WHAMMP3Q1A5X7 153 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms